Yoonia rhodophyticola: AABB31_05480
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Entry
AABB31_05480 CDS
T10513
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
yrh Yoonia rhodophyticola
Pathway
yrh00061
Fatty acid biosynthesis
yrh00071
Fatty acid degradation
yrh01100
Metabolic pathways
yrh01212
Fatty acid metabolism
yrh02024
Quorum sensing
yrh04146
Peroxisome
Module
yrh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
yrh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AABB31_05480
00071 Fatty acid degradation
AABB31_05480
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AABB31_05480
09145 Cellular community - prokaryotes
02024 Quorum sensing
AABB31_05480
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
yrh01004
]
AABB31_05480
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yrh04147
]
AABB31_05480
Enzymes [BR:
yrh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AABB31_05480
Lipid biosynthesis proteins [BR:
yrh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AABB31_05480
Exosome [BR:
yrh04147
]
Exosomal proteins
Exosomal proteins of breast milk
AABB31_05480
Exosomal proteins of breast cancer cells
AABB31_05480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WZU68368
UniProt:
A0AAN0MC43
LinkDB
All DBs
Position
complement(2408097..2410049)
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AA seq
650 aa
AA seq
DB search
MPEAATRGLASIPALLARNVAAHGNKPAYREKEFGIWQSWTWSEAATEIDALACGFLSLG
AEIGDHIAIAGRNRPALYWAMVAAQRIGCVPVPLYADAAAEEIAYALDHCGARFAVVGDQ
EQVDKIADVRETLTALEHVVYLDGRGLRKYDHAAMTSYAALQEAGRKSNHMDEVTRRSDA
RGYDDTCVMLYTSGTTGRPKGVVLSNRNVIETSKNSAEFDSLQPGDEVLAYLPMAWVGDF
IFSIGQAMWTGFCVNCPESAETMQTDLREIGPTYFFAPPRVFETQLTNVMIRMEDAGRFK
KWLFDRYMAVGRRIGPALLDKEPVSTLDKLRYRLADLLIIGPLKNTLGLSRVRVGYTAGE
AIGPEIFDFYRALGINLKQLYGQTEATVFITQQPDGEVRSDTVGVPSPGVELKIAESGEV
FYRSPGVFVEYYKNAESTASTKDEEGWVATGDAGFIEESSGHLRIIDRAKDVGKMADGAL
FAPKYVENKLKFFPNILEAVVFGAGRDFCTAFINIDLTAVGNWAERNNIAYSSYQELSQH
PQVLDTIQGHVADVNASVAQDPMLAGCQIHRFLVLHKELDADDGEMTRTRKVRRAVIADK
FGDLIDALYDGRGEVYTETEVTYEDGRKGKITATLDLRDAVVAQQRVAAE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccgcaacgcggggacttgcatctattcctgcgcttcttgctcggaatgtt
gctgcgcatggcaacaagcctgcctatcgcgaaaaggaattcgggatctggcaaagctgg
acatggtccgaagctgctactgaaatcgacgcattggcctgcggttttctgtcccttggt
gccgaaatcggcgatcacatcgccatcgccgggcgcaatcggcctgccttgtattgggca
atggttgccgcccagcggataggctgcgttcccgtccccctttatgctgatgctgcggca
gaagagattgcctatgccctggatcattgcggcgcccgtttcgccgttgtcggcgatcag
gaacaggtggacaagatcgccgatgttcgcgaaacgctgaccgcactggaacatgtcgtc
tatctcgatgggcgcggtttgcgtaaatacgaccatgccgcgatgacaagctatgccgcc
ttgcaagaggcgggccgcaaatcaaaccacatggacgaggtgacgcggcgcagcgatgcc
cgcggttacgacgatacctgtgtgatgttgtacacatcaggcacaaccggtcgccccaag
ggcgtcgtgctgtccaaccggaatgtgatcgagacctccaagaactctgccgaattcgat
agcctgcagcccggggacgaggttctggcctatctgccgatggcctgggtcggtgatttc
atcttttcgatcgggcaggcgatgtggacaggtttctgcgtcaattgccccgaaagcgcc
gagaccatgcagactgacctgcgcgagatcggcccgacctatttcttcgcaccaccgcgc
gtctttgaaacacaactcaccaacgtcatgatccgcatggaagatgccggtcgcttcaag
aaatggctgtttgatcgctatatggctgtcggccgccgcatcggacctgcattgcttgac
aaggaacctgtcagcacactggacaagttgcgctatcgtctggcggacttgttgatcatc
ggcccactgaaaaacacgctgggcctaagccgtgtccgcgttggctataccgcgggcgag
gcgattggccccgaaatctttgatttctatcgcgcgctgggcatcaacctcaaacagctt
tacggccaaaccgaggccactgttttcatcacccaacagccagatggcgaagttcggtca
gatacggttggtgttccaagccccggtgttgaactgaagatcgcggagagtggtgaagtt
ttctatcggtcgccgggtgtctttgtcgaatattacaagaatgccgaaagcaccgcgtca
accaaggatgaagaaggctgggtcgcgacaggtgacgcaggctttatcgaggaaagcagc
ggacacttgcggattatcgaccgtgccaaggacgtgggcaaaatggccgatggtgcgctg
tttgccccgaaatacgtcgaaaacaagcttaagttctttcccaacatattggaggccgtc
gttttcggcgccggacgggatttttgcacggctttcatcaatattgatctgacggcggtc
ggcaactgggccgaacgcaacaatatcgcctactccagctatcaggaactgtcacaacac
ccgcaggtcctcgacacgatccagggccatgtggcggacgtcaacgcgtctgttgcacag
gatccaatgctggcaggctgccaaattcaccgtttccttgttcttcacaaagaactcgac
gccgacgatggcgaaatgacccggacgcgcaaagtacggcgtgccgtgattgccgataaa
ttcggcgatctgattgatgccctctatgacgggcgcggcgaggtctacaccgagacggaa
gttacctatgaggacgggcgcaagggcaagattactgcgacacttgacctgcgtgatgcg
gttgtcgcgcaacagcgcgtggccgccgaatga
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