Yoonia rhodophyticola: AABB31_06630
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Entry
AABB31_06630 CDS
T10513
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
yrh Yoonia rhodophyticola
Pathway
yrh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yrh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AABB31_06630 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yrh03019
]
AABB31_06630 (pnp)
03016 Transfer RNA biogenesis [BR:
yrh03016
]
AABB31_06630 (pnp)
Enzymes [BR:
yrh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AABB31_06630 (pnp)
Messenger RNA biogenesis [BR:
yrh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AABB31_06630 (pnp)
Transfer RNA biogenesis [BR:
yrh03016
]
Prokaryotic type
tRNA degradation factors
AABB31_06630 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WZU68561
UniProt:
A0AAN0MHH7
LinkDB
All DBs
Position
complement(2174579..2176711)
Genome browser
AA seq
710 aa
AA seq
DB search
MFNEVKKSMQWGEETLTLETGKVARQADGSVIATLGETSVMANVTFARAQKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFMGPIAACRVGFVDGDYVLNPEIDDMHNLRLNPEQR
LDLVVAGTKDAVMMVESEAYELTEEEMLGAVTFAHDAIQPVIDLIIDLAEECAKEPFDFQ
PVDYSELSAAVKAAGEDKMRAAYAITDKQERTAAVADAKAAIVEALTEEQQEDGNLGAAL
KKLESAVLRGDVVKNGKRIDGRALDTIRPIVSETGILPRTHGSALFTRGETQGLVVTTLG
TGDDEQMIDALTGMYKSNFMLHYNFPPYSVGEVGRVSGPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLVMEDDGDYA
ILSDILGDEDHLGDMDFKVAGTENGITSLQMDIKIAGITPEIMSKALDQAKAGRLHILGE
MGKALTGAQEFSVHAPKIETMQIPTDKIREVIGSGGKVIREIVETSGAKVDINDDGVIKL
ASNDAEAIKKAYDMIHSIVAEPEEGVIYKGTVVKLVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVWVKLLGFDDRGKVRLAMKMVDQETGKEIAKEEAAE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgaagtgaaaaaatcgatgcagtggggcgaagaaacgctcacactggaaacg
ggcaaggttgcccgccaagccgatggctctgtcatcgcaacgctgggcgaaaccagcgtc
atggccaacgtgacattcgcacgcgcccagaaacccggtcaggacttctttccgctgacc
gtccactaccaagagaaatactatgctgccgggaaagtcccaggcggctttttcaagcgc
gaagcgcgtccaactgaaaaagagacgctaacggcgcgcctgattgaccgtccgatccgc
cccctgttcgtccccggcttcaaaaatgaagtgctggtgatgtgtacggttctgtcccac
gatctggtcaacgatcctgatatggtcgcgatgatcgcggcgtctgcagctctgaccatt
tctggcgccccattcatgggtccgattgcggcctgccgcgtcggctttgtcgatggcgac
tatgtgctgaacccggaaatcgacgacatgcataacctgcgcctgaacccagagcagcgt
ttggaccttgttgtcgccggcaccaaagacgccgtgatgatggtggaatcagaagcttat
gagctgaccgaggaagaaatgctcggcgcggtgacattcgcccatgatgccattcagccg
gtcatcgacctgatcattgatctggccgaggaatgcgcgaaagagccatttgacttccag
cctgttgattattccgagctgtcagccgctgtgaaagccgccggcgaggacaaaatgcgt
gcagcttacgcgatcaccgacaagcaggaacgtactgccgcagtcgctgacgccaaggcc
gccattgttgaggccctgaccgaagaacagcaggaagacggcaaccttggtgccgctttg
aaaaagctggaatcagcagtgctgcgcggcgatgtggttaagaacggcaagcggattgac
gggcgtgcgctcgacactattcgccctatcgtctctgagactggcatcttgccacgaacc
cacggttccgccctgttcacacgcggtgaaacccaaggtctggttgtgaccacattgggc
accggcgacgatgagcagatgatcgacgcgctgaccggcatgtataagtcaaacttcatg
ctgcattataacttcccgccatattctgtgggtgaagttggtcgtgtatccggccctggc
cgtcgtgagattggtcacggtaaattggcctggcgtgcgctgcaagcggttttgccagca
gcaacggacttcccctacaccatccgcgttgtgtccgagatcactgaatcaaacggctcg
tcttcaatggcgtctgtctgcggtgggtccttgtccatgatggatgccggtgtgccgttg
aaagccccggttgctggtgtggccatgggtcttgtgatggaagatgatggcgactacgcg
atcctgtctgacattctgggtgatgaggatcaccttggcgacatggatttcaaagtcgcg
ggtaccgaaaatggtattacgtccttgcagatggacatcaagatcgcaggcatcacgccc
gagatcatgtccaaagcattggatcaggccaaggctggccgtctgcatatcctcggcgag
atgggcaaagccctgactggcgcacaggaattcagtgtccacgcgcccaagatcgaaacg
atgcaaatcccgaccgacaagatccgggaagtcattgggtccggtggtaaggtcatccgc
gaaatcgtggaaacatcaggtgccaaggtcgacatcaatgatgacggcgtgatcaaactg
gcctctaacgatgccgaagcgatcaagaaagcctatgacatgatccattccatcgtggcc
gagcccgaagaaggcgtgatctacaaaggcacagttgtgaagctggtcgactttggggca
ttcgtgaacttctttggcaagcgcgacgggttggtccacgtgtcccaaattgaaaaccgc
cgcctgaaccatccttccgatgtcctcaaagaaggtcaggaagtctgggtcaaactgctg
ggctttgacgatcgcggcaaggtccgtttggccatgaaaatggttgatcaggagaccggc
aaggaaatcgccaaggaagaagctgccgagtaa
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