Yoonia rhodophyticola: AABB31_11225
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Entry
AABB31_11225 CDS
T10513
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
yrh Yoonia rhodophyticola
Brite
KEGG Orthology (KO) [BR:
yrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yrh03032
]
AABB31_11225
03400 DNA repair and recombination proteins [BR:
yrh03400
]
AABB31_11225
Enzymes [BR:
yrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AABB31_11225
DNA replication proteins [BR:
yrh03032
]
Prokaryotic type
DNA Topoisomerases
AABB31_11225
DNA repair and recombination proteins [BR:
yrh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AABB31_11225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
WZU69360
UniProt:
A0AAN0NLT5
LinkDB
All DBs
Position
complement(1276860..1277825)
Genome browser
AA seq
321 aa
AA seq
DB search
MKPAGLIYFPDTKPGFARKRRGRGFSYLDTDGRLITDRTVRQRLAALAVPPAYESVWMCP
VENGHLLATGRDERGRKQYVYHPDWTAFRAQSKFDDLPAFGHALPRIRRRVQTDLQEDAG
EREFALAAAVTLIDRTALRVGSPQYVEENNSYGALTLRNRQIALSGKDIALNYRAKGGQK
VRTTITDAKLARILDKISDLPGANLLTWVDAGGAPQSLSSEALNAYIADAAGQAGITAKT
FRTWAGTCAAFEVAAQGGASIKDMATAAAEVLHNTPAIARNSYIHPAVIALAGDDAPRVT
PADRHGLKVNEQHLLGFLEKS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcccgccggtctgatctatttccctgacacaaagcccggctttgcccgcaaacgc
cggggcagggggttttcatatcttgatacggatggtcggttgatcactgatcgcaccgtc
aggcagcgtcttgcggcccttgccgtcccgccggcttatgaaagtgtctggatgtgccct
gttgagaacggccatctcttggcaaccgggcgcgatgaacgcgggcgcaagcagtatgtg
tatcatccggactggacggcctttcgggcgcaatcgaagtttgacgatctgccggccttt
gggcatgccctgccacgcatcagacggcgggttcagacagacctgcaagaggacgcgggc
gaaagggaatttgcgctcgcggcggcggtgacattgattgaccgtacggcactgcgcgtg
ggcagtccgcaatatgtggaagaaaacaacagctatggcgcgctgaccttgcgcaaccgg
caaattgcgctctcggggaaagatatcgcgctgaactatcgcgcgaagggcggccaaaag
gtgcggacaacgatcaccgatgccaagcttgcgcgcatcctggacaagatcagcgatcta
ccgggtgccaaccttttgacatgggtggatgcgggtggcgcaccgcaatcgctcagttca
gaggcgctgaacgcctatatcgcggacgcggcagggcaggcgggcatcacggccaaaacg
ttccggacatgggcagggacatgcgcggcctttgaggtcgccgcacagggcggcgcctct
atcaaggacatggccaccgcggccgccgaggttctgcacaatacgcctgcgattgcgcgc
aatagctacattcacccggcggtcattgcgttggccggcgatgacgcaccgcgcgtcaca
cccgcagaccgacacgggctgaaggtgaacgagcagcatcttcttggttttttggagaaa
tcgtag
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