Yoonia rhodophyticola: AABB31_11510
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Entry
AABB31_11510 CDS
T10513
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
yrh Yoonia rhodophyticola
Pathway
yrh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AABB31_11510 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yrh03400
]
AABB31_11510 (xseA)
Enzymes [BR:
yrh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AABB31_11510 (xseA)
DNA repair and recombination proteins [BR:
yrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AABB31_11510 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
UGSC
DUF2478
IMD
Motif
Other DBs
NCBI-ProteinID:
WZU69407
UniProt:
A0AAN0NKB5
LinkDB
All DBs
Position
complement(1226570..1228072)
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AA seq
500 aa
AA seq
DB search
MNDLFDDGPADNTPEFSVAEISGAVKKAIEGGFSHVRVRGEIGRVSRPASGHIYLDLKDD
RAVLAGVIWKGRAQALAHRPEEGMEVVATGKLTTFPGQSKYQMVIEDVAPAGAGALMAML
EKRKAQLQAEGLFAPERKKPLPFLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWPVA
VQGQKCAPEVAAAIKGFNDLTPGGALPRPDLLIVARGGGSLEDLWGFNEEIVARAAAASD
IPLISAVGHETDTTLIDFVSDQRAPTPTAAAELAVPVRLELLAWSEQQGARLSRALTNGL
QQRQQRLRDLARALPQVDSLVEGPRQRLDYLSDRLPAALRGAAAQKRLKLSEASLRPSIL
SRRVAEDRRRLDGLANRLTPALTRKSRDKRQAFETALRGLRVALLDQRVAHQAERLETLS
RRLSDRASRQQAERRARLDALDRLRETLGYVETLKRGYAVVRGDGAVVTDKAAANAATHL
EVEFADGRVVVRDDSQGKLI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgatctttttgacgacggaccggcggacaacaccccggagttttccgttgctgaa
atctcgggggccgtcaaaaaggcgattgagggcgggttttcacatgttcgcgtgcggggc
gaaatcgggcgtgtgtcgcgcccggcctccggacatatctatctggatttgaaagatgac
cgggccgtgctggccggcgtgatctggaagggcagggcgcaggccctggcccaccgcccc
gaggaagggatggaagttgttgccaccggcaaattgaccacctttcctggccaatccaaa
taccagatggtgatcgaggatgtggcgccagccggggctggcgcattgatggccatgctt
gaaaagcgcaaggcgcaattgcaggccgaaggattatttgcgcccgaacgcaagaagccc
ctgccgttcctgcccgagattatcggggtcgtcacatcgccatctggcgcggtaatccgg
gacattctgcaccggttgcgggaccggttcccgcgcaaggtgctggtctggccggtcgct
gtacaggggcagaaatgtgcgcccgaagtggccgccgccatcaagggtttcaatgatctg
acccctggcggggccttgccgcggcctgaccttctgatcgtggctcgcggcggcggatcc
ttggaggatttgtgggggtttaacgaagagattgttgcccgcgcggcggcggcgtccgat
atcccgctgatttctgctgtaggccacgagacggacacgaccctgattgactttgtctcg
gatcagcgggcgccgacgccgacggcggctgcggaactggctgttcctgtccggctggag
ttgttggcctggtcggaacagcagggcgcgcgcctgtcgcgggcattgaccaacgggctg
caacaacgccagcagcgtctgcgcgatctggcgcgcgcattgccgcaggttgatagcctg
gtcgaaggaccgcgccagcggctggactatctgtccgacaggctgccagccgcactgcgt
ggggcggctgcgcaaaagcggttgaaattgtccgaagcatcgttgcgcccgtctatcctg
tcgcgtcgcgttgccgaagatcgccgtcggctggacgggttggccaatcgtctgacccct
gcgctgacccgcaaatcccgcgacaagcggcaggcattcgagacagctttacgcggtttg
cgggttgcactgctcgaccaacgcgtggctcatcaggcagagcggctagagacgctgtcg
cggcgcttgtcagatcgcgccagtcgccagcaggcggaacgccgggcgcggctggatgcg
cttgatcggctgcgcgaaactcttggatatgtcgaaacgctaaagcgcggctatgctgtt
gttcgcggcgacggtgccgttgtcaccgacaaggcggcggccaatgcagcaacacatctg
gaggtcgaatttgccgatgggcgcgtcgtggtgcgtgatgattcgcagggaaagctgatt
tag
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