Yoonia rhodophyticola: AABB31_12140
Help
Entry
AABB31_12140 CDS
T10513
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yrh Yoonia rhodophyticola
Pathway
yrh03420
Nucleotide excision repair
yrh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AABB31_12140
03430 Mismatch repair
AABB31_12140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yrh03400
]
AABB31_12140
Enzymes [BR:
yrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AABB31_12140
DNA repair and recombination proteins [BR:
yrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AABB31_12140
MMR (mismatch excision repair)
Other MMR factors
AABB31_12140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WZU69581
UniProt:
A0AAN0MIN1
LinkDB
All DBs
Position
complement(1096753..1099143)
Genome browser
AA seq
796 aa
AA seq
DB search
MNGFSEDDAFEAAVPLSQQAMAQRAPTYLDGLNPAQREAVETLQGPVLMLAGAGTGKTKA
LTTRIAHLLAKGTARPHEILAVTFTNKAAREMKSRIGGHMGEAVEGMPWLGTFHSVCAKL
LRRHAELVNLKSNFTILDTDDQIRLMKQLIAAAGIDDKRWPARMLSGIIDGWKNKAYTPD
KVPVADSGAFDHKGVDLYAAYQARLRDLNAVDFGDILLHMVTIFQTHDDVLQQYQRWFRY
ILVDEYQDTNVAQYMWLRLLAGGHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAHV
VRLEENYRSTPHILAAASGVIAANKGRLGKTLFTSREEGEKVRLIGHWDGEEEARWIGEE
VEAMQRGTRGLDPVSLDNMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDA
MAYFRLAVSPEDDLAFERIVNTPKRGLGDKAVQTIQRTARSNGVSLVEGARLCCQGKLLG
GKGLKELTILVDAIDRWHGQVRAEADTHVELAEMILDESGYTGFWQNDKTPEAPGRLENL
KELVKALENFENLQGFLEHVSLIMDNETEDAGEKVSIMTLHAAKGLEFPAVFLPGWEDGL
FPSQRSMDESGLKGLEEERRLAYVGITRAEEICTISFAANRRVYGQWQSAMPSRFIDELP
ADHVEVLTPPGLYGGGYGAAGMSASASPAAQGMMASDLHEKAHRADVYNSPGWKRLQARG
AQRGMSMPSEARNMTIDLDAVSAFTEGDRVFHQKFGYGEVIAIEGDKLQIEFDKAGSKHV
VAKFVVSASHADDVPF
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaatggattttcggaagatgatgcgtttgaagccgctgtgccgctgagccagcaggca
atggcgcagcgcgcgccaacctatcttgacgggttgaaccccgcacagcgcgaagctgtt
gagacgctgcaaggcccggtcttgatgctggccggcgccgggacgggcaagacaaaggcg
ttgaccacccgaattgcccatcttctggccaagggcaccgcccgcccgcatgagatactt
gctgtcacgttcaccaacaaagccgctcgcgagatgaaatcgcgcatcggcggccatatg
ggtgaggcggttgagggcatgccgtggcttggcacgttccattccgtctgcgccaagctt
ttgcgccgtcatgcggaactggtgaacctgaagtcgaattttaccattctggataccgat
gatcagatcaggttgatgaagcaactgattgcggcggccggcattgacgacaagcgttgg
ccggcccggatgttgtcaggcatcattgatggctggaagaacaaggcctacacgcctgac
aaagtgccggtcgctgatagcggtgcatttgatcacaagggggtggacctttacgccgcc
tatcaggcccggttacgcgatctgaacgccgtcgattttggcgatatcctgttgcatatg
gtgacgatcttccagacccacgacgacgtgttgcagcaatatcagcgctggttccgttat
atccttgtggacgaatatcaggataccaatgtcgcccaatacatgtggctgcgccttctt
gcgggcgggcataaaaacatctgctgtgtgggtgatgatgaccagtcgatctatggctgg
cgcggagccgaggtgggcaatatcctgcgctttgaaaaggattttccgggcgctcatgtg
gtgcggttggaggaaaattatcgctctaccccgcatatccttgctgccgcctctggcgtg
atcgcggcaaataaggggcggttgggcaagaccctgtttacatcgcgtgaggagggcgaa
aaggtccgcctgatcggccattgggatggtgaggaagaggcccgctggatcggggaggaa
gtggaggcgatgcaacgcggcacccgcggccttgatccggtcagccttgacaacatggcg
atcctcgtgcgcgcctcgcaccagatgcgcgctttcgaagataggtttctgacgattggc
ttgccctatcgcgtcatcggcggcccgcggttttatgaacggatggagatccgggatgcc
atggcctatttccgccttgccgtcagccccgaggatgatttggcgttcgagcggatcgtc
aatacccccaaacggggcctgggcgacaaggcggtccagaccattcaacgcaccgcgcgc
agcaatggtgtgtctttggtcgaaggcgcgcggctttgttgtcagggaaaattgctgggc
gggaagggcctgaaagagctgactattctggtggatgcgattgaccggtggcacggccaa
gtccgggccgaggccgacacgcatgtggagctggccgaaatgatcctggatgagagcggc
tataccgggttctggcaaaacgacaaaacacccgaggcaccggggcggcttgaaaacctc
aaggaactcgtcaaagcgctggaaaacttcgagaacctgcaagggttcctcgaacatgtc
agcctgatcatggataatgaaacagaagacgcgggcgaaaaggtcagcatcatgacgctg
cacgcggccaaggggcttgaatttccggccgtgtttctgcccggttgggaggatgggttg
tttccttcgcaacgctcgatggacgaaagcgggcttaagggcctcgaggaagagcgccga
ttggcttatgtgggcatcacccgggccgaggaaatctgcacgatctctttcgcggccaac
cggcgcgtctacgggcagtggcagtcggccatgccgtcgcggttcattgatgaattgcct
gctgaccatgttgaggtgctgacgccgcccggcctttacggtggcggctacggggcggcg
ggcatgtcggccagcgcgtcaccagcagcgcaaggtatgatggcgtcagacctgcacgaa
aaggcccatcgcgcggatgtctataattcgccgggttggaagcggttgcaggcgcgcggt
gcccaacgcggcatgtcaatgccgtccgaagcccgcaatatgacgattgaccttgatgcg
gtcagcgcctttaccgaaggcgaccgggtttttcatcagaaattcggctatggcgaggtg
atcgcaattgaaggcgacaagctgcagattgaattcgacaaggccggatcaaaacatgtg
gttgcgaaatttgtggtgagcgcgagccacgcagatgatgtgccgttctag
DBGET
integrated database retrieval system
