Yoonia rhodophyticola: AABB31_13960
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Entry
AABB31_13960 CDS
T10513
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
yrh Yoonia rhodophyticola
Pathway
yrh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AABB31_13960 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yrh03400
]
AABB31_13960 (xth)
Enzymes [BR:
yrh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AABB31_13960 (xth)
DNA repair and recombination proteins [BR:
yrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AABB31_13960 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WZU66178
UniProt:
A0AAN0M7T0
LinkDB
All DBs
Position
753652..754452
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AA seq
266 aa
AA seq
DB search
MKIATFNINGIKARIGALTDWIDEAQPDVAILQEIKSVDEGFPRDVFEDKGYNVETHGQK
GFNGVAILSKFPLEDVTRGLPGAEGAGREGVDDTEARYIEATVVGDKAVRICGLYLPNGN
PAPGPKYDYKLRWMDRLYQRAQALLANEEIALMAGDYNIIPQLEDAARPDAWRDDALFRM
DSRDAFRRIENLGFAEAFRLREAGAGHYSFWDYQAGAWDKNDGIRIDHFLLTPQCADLLN
NCWIEADIRGRDKPSDHVPVWVDLAA
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcgacattcaacatcaacgggatcaaggcgcgcattggcgcgttgaccgac
tggattgatgaggcccagcccgacgtcgccatcctgcaagaaatcaaatctgttgacgaa
ggcttcccccgcgacgtctttgaagacaagggatacaatgtcgaaacccatggccagaaa
gggtttaacggggttgcgatcctgtcgaaattcccgctcgaagatgtcacgcgcggcctg
cccggcgccgagggtgccggacgcgaaggcgtggatgatacagaggcccgctatatcgaa
gccaccgttgtcggtgacaaggcggtgcgcatttgcgggctttacctgcctaacggaaat
cccgcgcccggcccaaaatatgattataaactgcgctggatggaccggctgtaccagcgc
gcccaagcactgcttgccaatgaagagatcgcgctgatggccggcgactacaacatcatc
cctcaactggaagacgccgcccgccctgacgcatggcgtgatgacgcattgttccggatg
gacagccgcgacgccttccggcgtatcgaaaacctcggctttgccgaagccttccgcctg
cgcgaggctggtgcggggcattattcgttctgggactatcaggcaggcgcctgggacaag
aatgacggcattcgcatcgaccatttcctgctgaccccccaatgcgccgatctgctgaac
aattgctggatcgaggccgacatacgtggtcgcgacaagccctctgaccatgtgccggtc
tgggttgacctggccgcctga
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