Yoonia rhodophyticola: AABB31_21975
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Entry
AABB31_21975 CDS
T10513
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
yrh Yoonia rhodophyticola
Pathway
yrh00260
Glycine, serine and threonine metabolism
yrh00630
Glyoxylate and dicarboxylate metabolism
yrh00670
One carbon pool by folate
yrh00785
Lipoic acid metabolism
yrh01100
Metabolic pathways
yrh01110
Biosynthesis of secondary metabolites
yrh01200
Carbon metabolism
Module
yrh_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
yrh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AABB31_21975 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AABB31_21975 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AABB31_21975 (gcvP)
00670 One carbon pool by folate
AABB31_21975 (gcvP)
Enzymes [BR:
yrh01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
AABB31_21975 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
XFU26503
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Position
3331315..3334158
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AA seq
947 aa
AA seq
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MTFTPTDYLPYDFANRRHIGPSPAEMDAMLQVVGAKDLDALIDDTLPPKIRQKAPLDFGK
AKSERELLHHMRVTASKNRVLTSLIGQGYHGTVTPPAIQRNILENPAWYTAYTPYQPEIS
QGRLEALLNYQTMISDLTGLDIANASLLDEATACAEAMTMAQRISKSKQPGFFVDENCHP
QNIAVMRTRAQPLGIEIVVGNPDTLDPTQVFGAIFQYPGTHGHIRDFTPEIAKLHENKAI
GVVSADPLSLTLLKEPGAMGADIAVGTTQRFGVPIGYGGPHAAYMATKASYARNMPGRIV
GVSVDSHGNRAYRLSLQTREQHIRREKATSNVCTAQALLAVMAGFYAVFHGPEGLKAIAQ
RIHRKTARLAEGLKQAGFAVRPASFFDTITVDVGPLQAAVIKSALDEGINLRAVGTTQVG
ITLDERTRPATIEGVWRAFGIDRKDKDYTPHYQMPEKLIRTTDFLTHPVFHMNRAETEMM
RYMRRLADRDLALDRAMIPLGSCTMKLNAAAEMMPVSWREFSQLHPFCPKDQAAGYTEMI
DDLSAKLCDITGYDAISMQPNSGAQGEYAGLLTIASYHRANGQGHRNICLIPMSAHGTNP
ASAQMVGWKVVPVKSAENGDIDVADYKAKVAEHKDNLAGCMITYPSTHGVFEETVIEVCK
ITHAAGGQVYIDGANMNAMVGLSRPGDLGGDVSHLNLHKTFCIPHGGGGPGMGPIGVKDH
LIAHLPGDPNDGEGAVSAAPYGSPSLLPISWAYCLMMGGEGLTQATRVAILNANYIAKRL
EGAFDVLYKGPSGRVAHECIIDTRPFADSAGVTVDDIAKRLSDCGFHAPTMSWPVAGTLM
IEPTESETKAELDRFCDAMLGIRDEIRAIEDGAMDPLNNPLKNAPHTMEDLVKDWDRPYT
RETGCFPPGAFRVDKYWPPVNRVDNVWGDRNLTCTCPPMTDYAEAAE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcacgccgactgactatctgccctatgatttcgccaatcgtcgccatatcgga
ccgtcacctgccgaaatggacgcgatgttgcaggttgtcggggcaaaggacctggatgcg
ctgattgacgacacccttccgccaaaaatccggcagaaggcgccacttgatttcggcaag
gccaagtccgaacgggaattgctgcatcatatgcgtgtcaccgcatcaaaaaacagggtg
ctgacctctttgatcgggcagggctatcatggcacggtcacgcccccggctattcaacgg
aatatcctggaaaacccggcctggtacacggcctatacgccatatcagcccgagatatcg
caggggcgccttgaggcgctgttgaactaccagaccatgatatccgatctgacgggtttg
gatatcgccaacgcctcactcctcgatgaggcgaccgcctgcgccgaggcgatgaccatg
gcgcagcggatcagcaaatccaagcagcccggctttttcgtcgatgaaaattgccatccg
caaaatatcgcggtgatgcggacacgggcgcaaccgctggggatcgagattgttgtcggc
aatcctgatacgctggatccgacgcaggttttcggggcgattttccagtatccgggaacg
catgggcatatccgcgactttacgcccgaaatcgcaaagctacatgagaataaggcgatc
ggcgttgtctcggctgatccgctgtcattgaccttgttgaaagaacccggtgccatgggg
gccgatatcgcggtggggaccacccaacgctttggcgtgccgattggctatggtgggcca
catgcggcctatatggcgaccaaggccagctatgcgcgcaacatgcccggacgcattgtg
ggcgtttccgtcgacagtcacggcaaccgggcttaccggctgtcattgcaaacgcgtgaa
caacatattcgccgtgaaaaggcgacatcgaatgtctgtaccgcgcaggcactcttggcc
gttatggccgggttttacgcggtgtttcatggccccgaaggccttaaggcaattgcccaa
cgcatccaccgcaaaaccgcccgccttgccgaagggctaaagcaggcaggttttgcggtg
cgtccggccagcttttttgacacgatcaccgttgatgtaggcccgctgcaggcagccgtg
atcaaatcggcgctggacgaggggatcaatctgcgtgctgtcgggacgacccaggttggc
atcacccttgatgaacggacccgccctgccacaattgaaggcgtctggcgcgccttcggg
attgaccgcaaggacaaggactacaccccgcattaccagatgccagaaaagctgatccgg
acaaccgatttcctgacccatccggtctttcacatgaaccgggccgaaacagagatgatg
cgttacatgcgacgtctggcggacagggatctggcactggatcgggcgatgataccgctg
ggatcctgcacgatgaagctgaacgcggctgccgagatgatgccggtcagctggcgcgaa
ttctcgcagttgcatccgttctgccccaaggatcaggcggcggggtatactgaaatgatt
gatgatctgtccgcaaagctctgtgacatcacaggctatgatgcgatttcgatgcagcca
aattcgggcgcacaaggcgaatatgcaggtctgttgaccatcgcaagctatcatcgcgcc
aacgggcagggccatcgcaatatctgcctgatcccgatgagcgcgcatggcacaaatccg
gcctctgcccagatggtgggatggaaggtcgtgccggtcaaatcggccgagaatggcgat
attgatgtggcggattacaaagccaaggttgcagaacacaaagataaccttgccgggtgc
atgatcacctatccatctacccacggggtcttcgaggaaaccgtgatcgaggtatgcaag
atcacccatgcggcgggcgggcaggtctatatcgacggtgcgaatatgaatgccatggtc
ggcctgagccgccccggtgatctgggcggggatgtcagccatctgaacctgcacaagacc
ttttgcatcccgcatggcgggggtggtccgggtatggggccgattggtgtcaaggatcac
ctgatcgcccatttgccgggcgatcccaatgacggcgaaggtgcggtcagtgcggcgcct
tacgggtccccatcgctgctgccgatctcatgggcatattgcctgatgatgggtggggag
gggctgacccaggcgacgcgggtggcgatcctgaatgccaactatattgccaaacgcctc
gaaggggcgtttgacgttctttacaagggcccttcgggccgggtggcccatgaatgtatc
attgatacccgcccctttgctgacagtgcgggggtcaccgtcgatgacattgcaaagcgt
ctgtctgattgcggttttcacgcgcccaccatgtcttggccggttgcaggcacattgatg
attgaacccaccgagtccgagaccaaggccgaactcgaccgtttttgcgatgcgatgctg
gggatcagggacgagatccgtgcgattgaggatggcgcaatggacccgttgaacaacccg
ctgaagaacgcaccgcacacgatggaagacctcgtcaaggattgggaccgtccctacacc
cgggaaacggggtgttttccgcccggtgcctttcgggtggacaaatactggccgccggtc
aatcgcgtcgacaatgtctggggcgaccgcaacctgacctgcacatgcccacccatgacc
gactatgccgaggccgcagaatga
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