Yoonia rhodophyticola: AABB31_22060
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Entry
AABB31_22060 CDS
T10513
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
yrh Yoonia rhodophyticola
Pathway
yrh00541
Biosynthesis of various nucleotide sugars
yrh01100
Metabolic pathways
yrh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
yrh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AABB31_22060 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yrh01005
]
AABB31_22060 (kdsA)
Enzymes [BR:
yrh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
AABB31_22060 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
yrh01005
]
Lipid A
AABB31_22060 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WZU67563
UniProt:
A0AAN0MKI5
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Position
3316355..3317188
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AA seq
277 aa
AA seq
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MHDVTIGALTVSNDRPLLVIAGPCQLESTDHAQMIAGQMAEHCAAHGAQFIFKGSYDKAN
RTSLSGKRGLGMDEGLKVMQSVKSAIGCPVLTDVHTTQQCAPVAAVCDVLQIPAYLCRQT
DLLLAAGETGAAINIKKGQFLAPWDMTNVVTKVESTGNRRILLTERGATFGYNTMVADMR
SLPIMARTGYPVVMDATHSVQQPGGQGGSSGGQREFAPVMARAAVSLGIAAVFIETHEDP
DNAPSDGPNMIPLAKMGALVQNLMGFDALAKDAPLRV
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgtgacgattggcgcgctgactgtcagcaatgatcgcccattgcttgtcatt
gcggggccttgccagctggaaagcaccgaccacgcccagatgatcgccggccagatggca
gaacattgtgcggcgcatggggcgcagttcatcttcaagggcagctatgacaaggccaac
aggacatccctttccggcaagcgcggtttgggcatggatgagggtctgaaggtgatgcag
tcggtaaagtccgccattgggtgccctgttctgaccgacgttcatacaacgcaacaatgc
gccccggttgcagcggtttgcgatgtgctgcagatcccggcctatctgtgccggcaaacc
gatctgctgcttgccgcgggcgaaacaggtgcggcaatcaatatcaaaaaggggcagttc
ctggccccctgggacatgacgaatgttgtgaccaaggtcgaaagcaccggtaaccggcgc
atcctgctgacagagcgtggcgcgacattcggctataatacgatggtggccgatatgcgg
tctttgccgatcatggcgcgcacgggctatccggttgttatggacgcgacccattccgtg
caacagccgggcgggcagggtggatcctctggtggtcaacgcgaatttgcgcccgtgatg
gcccgcgcggcggtctcgttggggattgcggcggttttcattgaaacgcacgaggacccg
gacaatgcgccatctgacgggccaaatatgatacctctggctaaaatgggcgcattggtt
cagaatttgatgggtttcgacgcgctggccaaggacgcgccattgcgggtctag
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