Yersinia rohdei: CH64_1141
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Entry
CH64_1141 CDS
T03610
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yro03400
]
CH64_1141
DNA repair and recombination proteins [BR:
yro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
CH64_1141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
DUF7577
SWI2_SNF2
AAA_30
Zn_ribbon_3
zf-tcix
AAA_16
AAA_22
SLFN-g3_helicase
Zn_Ribbon_1
AAA
Motif
Other DBs
NCBI-ProteinID:
AJJ10002
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All DBs
Position
1266182..1267939
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AA seq
585 aa
AA seq
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MAFTLRPYQQEAVDATLAHFRRHTEPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQRQSEGKVVFGSVQSVARNLSLFDSAFSLLIIDECH
RISDEDDSQYQQIIQHLRHTNPRLRLLGLTATPYRLGKGWIYQFHYHGITRGDGKSLFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSSGMFPEADLDRELKQQQRITPH
IVSQIIEYASQRRGVMIFAATVEHAKEVYGLLPKGQAALVSATTPPAERDALITAFKQQQ
LHYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGNP
HDLFTPEVGSSKPHSDSQPVQVFCPDCGFANIFWGKCTESGEIIEHYGRRCQGWFEDDEG
ARAQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGMS
FETGHDAKGEWLKITYYDEDGTDTSERFRLTTPAQRMAFEQIFLRPHQRAPGVTLKWQTA
ADIIAQQALLRYPDFVVARRRGQWWQIREKIFDYQGRFRKADSLA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcttttacattacgcccttatcagcaagaagccgtagatgcgactttggcccatttt
cgtcgccacacagaaccggcactgattgtcttacccaccggggccggtaaaagtttggtg
attgccgaattggcaaagctggcccgtgggcgcgtgctggtactggcgcatgttaaagaa
ttggtcgcacagaatcatgccaaatattgcgcctatggcttagaggctgatatcttcgcc
gctgggctgcaacagcgccaaagcgaagggaaagtcgtgtttggcagtgttcaatctgta
gcacgaaacctttctttatttgatagtgccttttcactactgattattgatgaatgccat
cgaatcagtgatgaagatgacagccaataccaacaaattattcagcatttacgccacacc
aacccacggctacgtctgttggggttgaccgccaccccctaccgactgggcaaaggctgg
atttatcaatttcactatcacggtattacccgtggtgatgggaaatccctgtttcgcgac
tgtatttatgaattacccctgcgttacatgattaaacacggttttcttgttccaccggaa
cggctggatatgcccgtcgtccagtatgatttcagccgcctgaccagcaacagcagcggc
atgttccctgaagccgatttagaccgcgaactgaaacagcagcaaagaattaccccgcac
attgttagccagataatcgaatatgccagccagcgccggggggtgatgattttcgccgcc
accgtcgagcatgccaaagaggtctatgggctgctgcccaagggccaggccgccctggtg
agtgccacaaccccccctgcggagcgggatgcattaattaccgcctttaagcagcagcaa
ttgcattatttggtgaatgttgcagtgctgacgaccggttttgatgcccctcatgttgat
ttgattgccattctgcgcccgacggaatccgtcagtttatatcagcaaattgtcgggcgg
ggcctgcggctctcgccgggtaaaacagattgtctgattctggattacgccggtaacccc
cacgacctgttcacaccggaggttggcagcagcaaaccccacagcgacagccagccggtg
caggttttttgcccggattgcggttttgccaatatattctggggaaaatgcaccgaatca
ggcgagattatcgaacattatggccggcggtgtcagggctggtttgaagatgacgaaggc
gcaagagcgcaatgtgactaccgcttccgctttaaatcctgcccacactgcggggcagaa
aacgatattgcggcgcgccgctgtcatcagtgccaggaagtgttggttgaccctgatgac
atgttgaaagccgcattgaaattaaaagatgctctggtgctacgttgtggtgggatgagc
tttgaaaccgggcatgatgccaaaggtgagtggctaaaaatcacttattacgacgaggac
ggtacggataccagtgaacgttttcggttaaccacccccgcacaacgcatggcatttgag
caaattttcctgcgcccccaccagcgggctccgggtgtgacattaaaatggcaaaccgca
gcagatatcatcgcccagcaagcattattacgttatccggattttgtcgtcgctcgtcgt
cgtgggcagtggtggcaaatcagagaaaagatatttgattatcagggccgttttagaaaa
gcagattcactggcttaa
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