Yersinia rohdei: CH64_115
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Entry
CH64_115 CDS
T03610
Name
(GenBank) putative hns-like DNA-binding protein
KO
K03746
DNA-binding protein H-NS
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
yro03036
]
CH64_115
03400 DNA repair and recombination proteins [BR:
yro03400
]
CH64_115
Chromosome and associated proteins [BR:
yro03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
CH64_115
DNA repair and recombination proteins [BR:
yro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CH64_115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
COMP
DUF7219
NleF_casp_inhib
Motif
Other DBs
NCBI-ProteinID:
AJJ09656
LinkDB
All DBs
Position
125885..126130
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AA seq
81 aa
AA seq
DB search
MIDEFYVMYMYRKIQAEAATTDLKTLNQLLKKLRKVVAERREEYYLEIGEKRAQELRCER
LQKIWEKMKRDRVLPEDLIDR
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgattgatgaattctacgtaatgtatatgtatagaaaaatccaagctgaagcggctaca
actgatttaaaaaccttgaatcaactgttgaagaagctccgcaaggtagtagcggagcgc
cgtgaagaatactatctggagattggtgagaaaagggcacaagagctaaggtgcgagagg
ctacaaaaaatatgggagaaaatgaaacgtgacagagttttaccagaagatcttattgac
aggtaa
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