Yersinia rohdei: CH64_1163
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Entry
CH64_1163 CDS
T03610
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yro03032
]
CH64_1163 (gyrA)
03400 DNA repair and recombination proteins [BR:
yro03400
]
CH64_1163 (gyrA)
Enzymes [BR:
yro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CH64_1163 (gyrA)
DNA replication proteins [BR:
yro03032
]
Prokaryotic type
DNA Topoisomerases
CH64_1163 (gyrA)
DNA repair and recombination proteins [BR:
yro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CH64_1163 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
AJJ10788
UniProt:
A0A0U1HVC9
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Position
complement(1293495..1296161)
Genome browser
AA seq
888 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLSEVIDGCLAYIEDENITIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDILVAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAATPAEAKAGLIANPWELGNV
ASMLERAGDDAARPEWLEAEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLTIIGELIFILENPERLMEVIREELMAIKEQYNDPRRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGRHIFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSALGKVVRFPEGQVRSMGRTATG
VRGINLNGDDKVVSLIIPRGDGDILTVTENGYGKRTEVTEYPTKSRATQGVISIKVSERN
GKVVGAVQVATTDQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEHVVGLQRVA
EPEEDDDILDGESLEGEEGADEAVRAAPEDDAVEDDADDADEATDDEA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaataacaccggtcaacatcgaggaagagctgaaaagctcc
tatctggattatgcgatgtccgttattgtcggacgtgctttaccagatgtccgggatgga
ctgaaaccggttcaccgtcgcgtactgtttgcgatgaatgtactgggtaatgactggaat
aaaccatataaaaaatcggcccgtgtagtcggggacgttatcggtaaatatcacccgcat
ggtgacagcgcggtctacgacacaatagtgcgtatggcccagccgttttcactgcgctat
atgctggtggatgggcagggtaacttcggttccgttgatggcgactccgccgcggcgatg
cgttataccgaaatccgtatgtctaaaattgctcacgagttgttagcggatttagaaaaa
gacaccgttgacttcgtgcctaactatgatggtacggaacaaatccctgcggtgatgccg
acccgaatccctaacctattggttaacggttcgtctggtattgctgtcgggatggcaacc
aatattccgccacataacctttctgaggttattgatggctgcctggcctatattgaagat
gaaaacatcaccatcgaaggattgatggaatatattccggggccagatttcccaaccgca
gcgattatcaatggtcgccgtggtattgaagaagcttatcgcactggtcgtggcaaggtg
tatatccgtgcccgggctgaagtcgaagctgatgctaaaaccggtcgcgagactattatt
gttcacgagatcccgtatcaagtgaacaaggcgcggttgattgaaaaaatcgccgagctg
gtaaaagaaaaacgtgtagaaggcatcagtgcgttgcgcgatgagtctgataaagacggc
atgcgcatcgtgattgaaatcaaacgtgatgcggtcggggaagtggtgctaaataacctc
tattctctgacacaattgcaggtgactttcggtatcaatatggtggctctgtctcaaggg
cagcctaaattgcttaacctgaaagacattctggttgcctttgttcgtcaccgccgtgaa
gtcgtcacgcgccgtactatctttgagttgcgcaaagcacgtgaccgcgcgcatatcctt
gaagcgctggcgattgcattggctaatatcgatccgattatcgaattgattcgccgtgca
gcaacacctgcggaagcaaaagcagggctaattgctaacccgtgggaattaggtaacgtt
gcttcaatgttggaacgtgccggtgatgatgctgcccgccctgaatggctggaagcagag
ttcggtattcgtgacggcaaatattacctcaccgagcagcaagctcaggcaattttggat
ctgcgtttgcagaaactgaccggcctggagcatgaaaaactgctggatgagtataaagag
ctgctgaccatcattggtgagttgatctttattctggaaaacccagagcgcttaatggaa
gtaatccgcgaagagttaatggcaattaaagagcaatataacgatccgcgtcgtactgaa
attactgcgaacacctctgacatcaatattgaagacctgattaatcaggaagatgtggtt
gtgacactgtcccatcagggttatgtcaaatatcaaccgctgactgattacgaagctcaa
cgtcgtggtggtaagggtaaatcagctgcacgtatcaaagaagaagacttcattgatcgc
ctgctggtggccaacacccacgatactatcttgtgcttctcaagccgtggtcgtctctat
tggatgaaggtttaccagttaccggaagccagccgtggtgcccgtggtcgcccaatcgtc
aacttattgcctcttgagccaaatgagcgtattaccgccattctgccagtgcgtgaatat
gaagaagggcgtcacatctttatggcaaccgccagcggtaccgtgaagaaaactgcatta
accgagtttagccgcccacgcagtgccggtattattgccgtcaatctgaatgagggtgat
gaactgattggtgtggatctgacggatggcagcaatgaagtcatgctgttctctgcatta
ggtaaagtggtgcgcttccctgaaggtcaggtgcgctctatgggccgtactgcgaccggt
gtgcgcggtattaacctcaatggtgatgacaaagttgtttctctgattattcctcgtggt
gatggcgatattctgacagtgactgaaaacggctacggaaaacgtaccgaagtgactgaa
tatccaaccaaatctcgtgcgactcagggggttatctccattaaagtcagtgagcgtaat
ggtaaagttgttggtgctgtccaagtggccaccaccgaccaaatcatgatgattactgat
gccggtactctggtgcgcacccgcgtatctgaagtgagtatcgtgggccgtaatactcag
ggtgtgacactgatccgtactgctgaagatgagcatgtggtcgggttgcaacgcgtcgct
gagccggaagaagatgatgacatccttgatggcgaatcattggaaggtgaagagggcgct
gatgaagcggttcgtgctgcaccggaagatgatgctgttgaagatgacgctgacgatgcg
gacgaagcaaccgacgacgaagcataa
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