Yersinia rohdei: CH64_1185
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Entry
CH64_1185 CDS
T03610
Symbol
idnR
Name
(GenBank) HTH-type transcriptional regulator idnR
KO
K06146
LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yro03000
]
CH64_1185 (idnR)
Transcription factors [BR:
yro03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CH64_1185 (idnR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_IclR
HTH_10
HTH_3
HTH_Crp_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AJJ09912
UniProt:
A0A0U1HVA8
LinkDB
All DBs
Position
complement(1320962..1321954)
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AA seq
330 aa
AA seq
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MKNQRVTLQDIALLAGVTKMTVSRYLRTPEKVAPETGERIAQVMVEVNYSADPDGENSIN
QKIPRIGILIPSFNNQIFSDLLAGIESVTAASGYQTLVVNYNYSKEREEEQIVNLLSCQI
SGLILTDSEHTLRADKYLNAAELPVAQVMDLEPQFNRITVGFNNYQAAYDMTATLLASGK
QNIVYFGSMSDARDRKRYQGYSQAISDAGFVPLHITPNKVSSVSIGAGMLALARQMYPQL
DAIFCTNDDMAVGVLQECLKLGIGVPADMAISGFHGLDIGQATTPVLASVTTPRFEMGKV
AAEILIKKIKKIPTIEQVDLHYRISLGGTI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccagcgtgttacgttacaggatatcgcgttacttgccggcgtgaccaaaatg
acagtcagccgttacttacgcacgccggaaaaagtggccccagaaacgggggagcgaatt
gctcaagtcatggttgaagtcaattacagtgcggaccctgatggggaaaacagtattaat
caaaaaatcccgcgtattggcatcttaattccttcctttaataaccagattttctccgat
ttactggcaggcattgaatctgtgaccgctgccagtggttaccagacattagtggtgaat
tataactacagtaaagaacgcgaggaagaacagatagttaatctgctatcctgccagatt
tccgggcttattcttaccgactctgaacataccttacgcgctgataaatatttgaatgct
gcagaacttccggtggcgcaggtgatggatctggagcctcagttcaaccgcattacggtg
ggttttaataattatcaggcggcctatgacatgacggcgacattgctggccagtgggaag
cagaatattgtctattttggctcgatgtctgatgcacgagatcgcaaacgatatcaagga
tatagccaggctattagtgatgctggttttgtgcctttgcatattaccccgaacaaagtc
tcttctgtttctatcggtgctggcatgttggcattggcacgacaaatgtatccacagctc
gatgctattttttgtactaatgatgatatggccgtgggcgtgttacaagaatgcttgaaa
ctgggaatcggggtgcctgctgatatggctatttccggttttcatgggttggatattggc
caggccaccactccggtacttgccagtgtcacgaccccacgttttgaaatgggcaaagtt
gccgctgaaattttgattaagaaaatcaaaaaaatcccgacaattgaacaggttgacctt
cattatcgtatttcacttggtggcacaatttaa
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integrated database retrieval system
