Yersinia rohdei: CH64_1396
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Entry
CH64_1396 CDS
T03610
Name
(GenBank) RND transporter, hydrophobe/amphiphile efflux-1 family protein
KO
K18324
multidrug efflux pump
Organism
yro
Yersinia rohdei
Pathway
yro02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CH64_1396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yro02000
]
CH64_1396
Transporters [BR:
yro02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CH64_1396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AJJ09107
LinkDB
All DBs
Position
1541656..1544781
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AA seq
1041 aa
AA seq
DB search
MANFFIDRPIFAWVLAIILCLTGALAISTLPVEQYPNLAPPNVRISASYPGASAQTLENT
VTQVIEQSMTGLDNLLYMSSQSSNSGSASITLTFQAGTNPNEAMQQVQNQLQSAIKKLPQ
DVQQQGVSVSKSGDNTLMMVAFVSTDGSMDKQDIADYVASNLQDPLSRIEGVGSIDAFGS
QYAMRIWLDPNKLNNYQLTTQDVVTAIQSQNSQIAVGQLGGTPSVDNQALNATINAQSQL
QTPEQFRDITLRVNQDGSLVTLGEVAKVEMGAEKYDYLSRFNGQAASGMSIKLASGANEL
QTDELVKARIAELTPFFPHGLEAKIAYETTPFVKASIKDVVKTLLEAILLVFFVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSIFGFSINTLTLFAIVLAIGLLVDDAIVVVENVERVM
SEEGLDPREATRKSMGQIQGALVGIALVLSAVFIPMAFFGGTTGAIYRQFSITIVSAMVL
SVLVALILTPALCATMLKPIKAGHHQAKGGFFGWFNRTFDRSARSYERGVARVLHHSLRY
MLLYLLLLGGLALLFLKLPTSFLPLEDRGVFMAQVQLPVGSTQQQTLRVVEKVENYFLTA
EKDNVLSVFATVGSGPGGNGQNVARLFIRLTDWEQRKNSQDSSFAIIERATKVFNKIAEA
RVSVSSPPAISGLGGSSGFDMELQDHGGLGHEKLMAARDQLLQMASQDPALTRVRHNGLD
DSPQLQIDIDQHKARALGVSLDDINNTLKTAWGSTYVNDFVDRGRVKKVYVQSEATARML
PEDVNKWYVRNNNGSMVPFSAFSTTRWEYGSPRLERYNGYSALEIVGEAAPGVSTGTAMN
VMEDLVQKLPAGFGLEWTGMSYQERLSGSQAPALYAISLLVVFLCLAALYESWSIPFSVM
LVVPLGVIGAVAATWMRGLENDVYFQVGLLTIIGLSAKNAILIVEFASELNNKGKDLVEA
TLEASRQRLRPILMTSLAFIFGVLPMAISQGAGSGSQHAVGTGVMGGMISATVLAIFFVP
LFFVLVRRRFPGKPPRAKEQE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattttttcatcgaccgcccgatttttgcctgggtattggcgataattttgtgt
cttaccggggcattggcaatctcaaccttgcctgttgagcaatacccgaacctggctccc
cccaatgtgcgcatcagtgcttcatatcctggcgcgtctgctcagacattggaaaatacc
gtcacccaggtcatagagcaaagtatgactggcctggataacctgctgtatatgtcatcg
caaagcagcaactccggtagtgcatcaatcaccctgaccttccaggcgggcaccaaccct
aatgaagccatgcagcaggttcagaatcagttgcaatctgccattaaaaaactgccccaa
gatgtacaacaacaaggggtttcagtttctaaatcaggtgataacaccttgatgatggta
gcatttgtctctaccgatggcagcatggataaacaagatattgccgactacgtcgccagt
aatctgcaagacccactgagccgcattgaaggggttggcagtatcgacgcctttggctcg
caatatgccatgcgtatttggcttgatcctaataaactcaataattatcaactcactacg
caagatgtcgtcactgcaattcaatcgcaaaatagccagatagccgtagggcaattgggc
ggaacaccttctgttgataaccaggccctgaacgccaccattaatgctcaatctcaatta
cagacaccagaacagttcagagacataaccctgcgagtcaatcaggacggctcattggtc
actctgggggaggtggcaaaagtcgagatgggggccgagaaatatgactatctgagccgc
tttaatgggcaagccgcatcaggcatgagcatcaagctggcatccggtgccaatgagttg
cagacggatgaattagttaaagcgcgcattgccgagctgaccccctttttcccgcacggc
ctggaagcaaaaattgcttatgaaaccacaccctttgtaaaagcctctatcaaggacgtg
gtaaaaacattattggaagccatcttattggttttctttgttatgtatttgtttttacag
aatttccgcgccacattaattccaaccatcgcggtgccagtagtgctgttggggacgttt
gcaatcctgtccatatttggattcagcatcaataccctcaccttgttcgccattgtgctc
gcgataggtttgctggtcgacgatgccatcgtggtggtcgaaaacgtcgagcgagtcatg
agcgaggaaggccttgatccgcgagaagcgactcgaaaatctatggggcaaattcagggc
gcactggtcggtatcgccttggtattgtcagcggtatttattccgatggccttcttcggg
ggaaccaccggcgctatttatcgccagttttcgattactatcgtctcagctatggtgctc
tcggtattggtggcattgattctcaccccagcactttgcgccactatgctcaagcccatc
aaagccgggcaccatcaggccaaaggcggtttctttggctggtttaaccgcacatttgac
cgcagcgctcgcagttacgaacgtggtgtcgcacgtgttttacaccacagcttgcgttat
atgctgttgtatttactgctgttaggtggattagcgctattatttctcaagttaccaacc
tctttcttacccttggaagaccgtggtgtctttatggcgcaggtacagcttcccgtcggc
tcaacccagcaacaaacactgcgagtggtcgagaaagtagaaaactatttcctgacagca
gagaaagataacgtgctgtcggtgtttgctactgtgggttctggccccggcggtaacggc
caaaatgtggcgcgtttgtttattcgtctgaccgactgggaacagcgcaaaaacagccaa
gactcttcctttgccattattgaacgcgcgaccaaagtctttaataaaattgccgaagcc
agagtctcagtcagtagcccaccggccatttctggcttgggtggctcctccggttttgat
atggagctacaagaccacggcggtttgggccacgaaaaactgatggccgcccgtgaccaa
ctgctgcaaatggcatcgcaagacccggccctaacccgggtgcggcataatggcctggac
gatagcccacaattgcaaatcgatattgaccaacacaaagcacgcgctctgggggtgtca
ttggatgatattaacaacacacttaaaactgcgtgggggtcgacttacgttaatgacttt
gttgatcgcggtcgggtgaaaaaagtctatgtgcaatcagaagccaccgcccgcatgttg
ccggaagacgtcaacaaatggtatgtgcgcaataataacggcagcatggtgcctttctcc
gcattctctaccacccgctgggaatatggttcaccacggctggagcgctacaatggctat
tccgcactcgaaatcgtcggcgaagccgctccgggcgtcagtaccggcaccgccatgaat
gtaatggaagatttggtccaaaaactgccggccgggtttggtctggaatggactggcatg
tcttatcaagagcggttatccggctcacaagcccctgccctctatgctatttcgctgttg
gtggtgttcttgtgtttggccgcattatatgagagttggtcaatcccattctcggtgatg
ttagtggtgccactcggggtgattggggcggttgccgccacctggatgcgcggtctggag
aatgacgtttatttccaggtgggtttactgaccatcatcgggttatcagccaaaaatgcc
atcttaattgtcgagtttgccagtgaattgaacaataaaggcaaagatttggtggaggcg
acattagaagcttcccgccagcgattaagacctatcctgatgacatcattggcatttatc
tttggtgtattgccaatggcgatcagtcagggggcggggtctggcagccagcatgccgta
ggtaccggggtgatgggcgggatgatttctgcgaccgtgctggccattttctttgtcccg
ctgttctttgtcttggtgcgccgccgcttcccgggcaaaccaccacgggctaaagagcaa
gaataa
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