Yersinia rohdei: CH64_1490
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Entry
CH64_1490 CDS
T03610
Name
(GenBank) beta-eliminating lyase family protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
yro
Yersinia rohdei
Pathway
yro00260
Glycine, serine and threonine metabolism
yro00460
Cyanoamino acid metabolism
yro00630
Glyoxylate and dicarboxylate metabolism
yro00670
One carbon pool by folate
yro00680
Methane metabolism
yro01100
Metabolic pathways
yro01110
Biosynthesis of secondary metabolites
yro01120
Microbial metabolism in diverse environments
yro01200
Carbon metabolism
yro01230
Biosynthesis of amino acids
yro01240
Biosynthesis of cofactors
yro04981
Folate transport and metabolism
Module
yro_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CH64_1490
09102 Energy metabolism
00680 Methane metabolism
CH64_1490
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CH64_1490
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CH64_1490
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CH64_1490
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CH64_1490
Enzymes [BR:
yro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CH64_1490
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
SapB_1
Motif
Other DBs
NCBI-ProteinID:
AJJ12430
UniProt:
A0A0U1HU20
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All DBs
Position
complement(1664177..1665430)
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AA seq
417 aa
AA seq
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MLKREMNIADYDADLWRAMQQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANVAVYSALLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYEDMARQAEIHKPKMIIGGFSAYSGI
VDWAKMREIADSIGAWFFVDMAHVAGLVAAGVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEELYKKLNSSVFPANQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVA
VFLDRGYKVVSGGTDNHLFLLDLVDKNITGKDADAALGRANITVNKNSVPNDPKSPFVTS
GVRIGSPAITRRGFKEEESRELAGWMCDVLDNINDEATVERIKQKVLEICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgcagatctatggcgtgcaatgcag
caagaagtggtgcgccaggaagagcacattgaactgattgcctctgagaactacaccagc
ccgcgagttatgcaggcgcaaggttcccagttgacgaacaaatatgctgaaggttatccg
ggcaaacgttattacggtggctgtgaatatgttgatatcgttgaacaattagccattgat
cgcgctaaagaattgtttggtgctgattacgccaacgttcaaccgcattccggttctcag
gccaacgtagccgtttattctgctttgctgcaaccaggcgatactgttctggggatgaat
ctggcacacggcggtcatttgacccacggctcaccagtaaacttctctggcaaactttat
aatatcgtgccttatggcattgatgaatctggcaaaattgattatgaagatatggctcgt
caggccgaaattcataaaccaaaaatgatcatcggcggcttctctgcttattccggtatt
gttgattgggcaaaaatgcgcgaaatcgctgatagcatcggcgcatggttctttgtcgac
atggctcacgttgcgggcctggtagctgcgggcgtttatccaaaccctgttccacatgcg
cacattgttaccaccaccacccacaaaactctagctggcccacgtggcggtttgattttg
gcaaaaggtggcgatgaagagctgtataaaaaattaaattcctcggtgttcccggcaaac
cagggcggcccgttgatgcatgttatcgctggcaaagcggttgcattgaaagaagcaatg
gaacctgagttcaaggtctaccagcaacaagtggctaaaaatgcaaaagctatggttgcg
gtcttcttggatcgtggttacaaagtcgtttctggtgggactgataaccatctgttcttg
cttgatttagtggataaaaatatcactggtaaagatgcagatgccgctttaggtcgtgcc
aatattactgtgaacaaaaacagcgttcctaacgacccgaaaagcccgtttgtgacttcc
ggtgtgcgtattggttctccggcgattacccgccgtggtttcaaagaagaagaatctcgt
gaactggcgggttggatgtgtgatgtgttggataacatcaacgacgaagcgactgtcgaa
cgcatcaaacaaaaagttctggaaatctgtgcccgtttcccggtttacgcataa
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