Yersinia rohdei: CH64_15
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Entry
CH64_15 CDS
T03610
Name
(GenBank) AAA domain family protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yro03000
]
CH64_15
Transcription factors [BR:
yro03000
]
Prokaryotic type
Helix-turn-helix
Other families
CH64_15
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
GAF_3
AAA_5
Mg_chelatase
AAA_2
AAA
AAA_19
HTH_8
MCM
DUF3369
AAA_16
AAA_7
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AJJ09696
LinkDB
All DBs
Position
16123..18282
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AA seq
719 aa
AA seq
DB search
MDSAKKLPRPTLAQVWQDTLFGVSKKLLLLRDIADLVNELRKLSFSVVRFQRVNLLLLNP
LYNQMTLYTHDEVTDVVTGQQNILFAEGPGGVAWQQHIPLQTDSHRMKREFFTVCHLAPY
QQLHSGCHFPLGHNNHWLGCVEFIKTDNSEFDEQTMAFLGLLAEVVAIAVDNITEINRAY
SEREQLRFERDHFRILVDVTNTVISKLELDVLAAEVSKEIHRFFNIDYISLALCGTHNDK
NKLNVFSSRYQTGKAVLHQQEWVDMTGTLAGQVLHSRELLLVNLANISLLAPDDKQLANM
LDEGLQIVCLLPLFFGHKMLGVLKLAQCRSDIFTDNNLKLLRQIAARIAIAVDNALAYNE
ITRLKDSLVNENLYLTDQIIHNEEFGEIIGHSAGIKAVLEQVEMVASSDCTVLILGETGT
GKELIARAIHNLSTRKNKRMVKMNCAAIPSGLMESDLFGHEKGAYTGAASQRIGRFEMAD
NGTLFLDEVGDIPLELQPKLLRVLQEREIERLGGSKIIPVDVRLIAATNRDLKSMMVNRE
YRSDLYYRLNVFPIVIPPLRERPEDIPLLVKFFTQKIAKRMNRTIDTIPSETLRLLSRLP
WPGNIRELENVIERAVILTRGTTLNLQLQELEYHLSPLDVAKPTQERAIHKPLLPESEEP
EFSESERAQIIRILRETNGVVAGPKGAAIKLGLKRTTLLSRMQRLGISVKSIEDEDSLM
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgcaaaaaaattaccccgtcccacattggctcaagtttggcaagataccttg
ttcggcgtttcgaaaaagttattattgctacgagatatagccgatctagttaatgaactc
aggaaactgtctttttctgttgtccgttttcaacgtgttaatttattactgcttaacccg
ctgtataaccaaatgacactttatactcatgatgaagtgactgatgtggtaacgggtcag
caaaatatcctgtttgccgagggccccggaggggttgcctggcagcaacatatccctttg
caaactgatagccaccgtatgaaaagggagttttttactgtttgccatttagcaccttac
cagcaattgcattctggctgccattttcccttaggccacaataatcattggttgggctgt
gttgagtttattaaaaccgataacagcgaatttgatgaacaaacaatggcttttttagga
ttactggcagaggttgtggccattgcagttgataatattactgaaataaatcgggcatat
tctgaacgcgagcaattacgttttgaacgggatcactttcggatattagtggatgtcacc
aacacggttatttctaaactggaactggatgtattagcggcggaagtctcaaaagaaata
caccgttttttcaatattgattacattagtctggcattgtgcggcactcataatgacaaa
aataaactgaatgttttttcttcccgttaccagacgggtaaagcggtgttgcaccagcag
gaatgggttgatatgaccggcacattagccggacaagtgttacatagccgggaattattg
ctggttaatctggcgaatatttcactgttggctcctgatgataagcaactggcaaatatg
ctggatgagggtttgcagatagtttgtttgttaccgctatttttcggtcataagatgctg
ggagtattaaagttagcacaatgtcgcagtgatatattcaccgacaataatctcaaactg
ttacggcaaatcgccgctcgaattgcaatcgcagtcgacaatgccttggcttacaatgaa
attacccgtctgaaagattctctagtaaatgaaaatctctatctcacagatcaaattatt
cataatgaagagtttggcgagataataggtcacagtgcaggaattaaagcggtattagag
caggttgagatggtggcctccagtgattgcactgtgttgattctcggtgaaaccggcacc
ggtaaagagttaattgcccgcgctattcataatttgagtacccgtaagaataagcgcatg
gtcaaaatgaactgtgccgctatcccctccggattaatggaaagtgacctgtttggtcat
gagaagggggcttatactggcgcggcatcacaacgtattggtcgttttgaaatggcggat
aatggcacgttatttcttgatgaagtcggggatattcctcttgaactgcaaccgaaactc
ttgcgggtattacaagagcgggaaatagagcggttggggggcagcaaaattatcccggta
gatgttcggctgatcgcggccactaaccgggatttaaaatcgatgatggtgaatcgggag
taccgcagtgatctgtattatcggctcaatgtttttccgattgttataccgccactgcgc
gaacggcctgaagatattcctttgctggtaaaattcttcactcagaaaatagccaaacgg
atgaaccgcaccatagatactattccgagcgagactttgcgtttgcttagccgtttacct
tggccgggtaatattcgtgagttggagaatgtgattgagcgggcggtgatcctcacgcgc
ggcaccacgttaaatttacagttacaagagctggaatatcatttgtcgccacttgatgtt
gcgaaaccgacgcaggaaagagccatccacaaacctttattaccagagagtgaagagccg
gagttttcagaatctgagcgagcacaaattattcggatattacgtgaaactaatggcgta
gttgctggccctaaaggtgctgcgattaaattgggactcaaacgcaccactttattatcc
cgcatgcaacggctcggaatatccgtaaaaagtatcgaagatgaagatagtttgatgtaa
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