Yersinia rohdei: CH64_1500
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Entry
CH64_1500 CDS
T03610
Name
(GenBank) bacterial extracellular solute-binding s, 3 family protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yro01011
]
CH64_1500
Enzymes [BR:
yro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CH64_1500
Peptidoglycan biosynthesis and degradation proteins [BR:
yro01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CH64_1500
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AJJ12458
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All DBs
Position
1680880..1682340
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AA seq
486 aa
AA seq
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MTRIKLNYFVIGVVALLLALALWPNIPWRNGQEGQLEQIKARGELRVGTISSPLIYSTGK
DGPSGLDYELAKRFADYLGVKLVMTPHHNINDLFDALDSNDVDMLAAGLIYNRERLNRAR
TGPAYYSVSQQLVYRLGQPRPKSFSDLKGQLIVASGSAHMTTLKQLKESKYPALNWGSSI
DRTGKELLEQVADGKLDYTLGDSVTIALLQRIHPQLAVAFDVTDEEPVTWYFSQSNDDSL
YAAMLDFYSSMVEDGSLARLEEKYLGHVGSFDYVDTKTFLSAIDNVLPTFRPLFEKHAGE
IDWKLLAAIAYQESHWNPQATSPTGVRGLMMLTRATASGLGVNDRVDPEESIRGGSVYLQ
RLMKKVPETIPEDERIWFALAAYNLGYGHMLDARKLTKSQNGNPDSWVDVKMRLPMLSQK
RYYPSTTYGYARGHEAYNYVENIRRYQDSLVGYLQEKEKKAAQHAAIEAELGKAYPVIGP
GWSINN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcgcataaaattaaactactttgttatcggcgtagttgccttacttctggccctt
gcattgtggcctaatattccttggcgtaatggccaagaagggcaactcgaacagataaaa
gcccgtggtgagctgcgagttggcaccataagctcaccacttatatactcgaccggaaag
gatggcccttccgggctcgactatgagctggcaaaacgttttgctgactatctgggggtt
aagctggtaatgaccccgcatcacaatattaatgatttgtttgatgctttagacagcaac
gacgtagacatgctggccgctgggctgatttataaccgtgaacgcctgaatcgggcgcgc
actggccctgcctattattcagtgtcacagcaattggtgtaccggctgggtcaaccacga
ccaaaatcatttagtgatttaaaaggccagctgatagtggcctctggctcggcgcatatg
accacattgaagcaacttaaagagagcaaatatccggcccttaactggggctcttctatt
gatcgaaccggaaaagagctgctggaacaagtggctgatggcaaactcgattataccctt
ggcgactcggtcaccattgccctgctgcaacgtattcacccgcaattagcggtggctttt
gacgtcaccgatgaagagccggtaacctggtatttctcgcaaagcaatgatgacagcctg
tatgctgccatgctcgatttttacagctcaatggtggaagacggcagtttggcgcggcta
gaggaaaaatatcttggccatgtcggcagctttgattatgtcgacaccaaaacgtttctg
tctgccatcgacaatgtactgcccactttccggcccttatttgaaaaacatgcaggcgaa
attgactggaaattgctggcggccattgcttatcaggaatcccattggaatccacaggcg
acctctccgaccggtgttcgcggtctgatgatgctgacacgcgccaccgccagtggattg
ggggtcaacgaccgggtagatcctgaagagagcattagaggcggttctgtatatttgcag
cggctgatgaaaaaagtaccagagaccattccggaagatgagcgaatctggtttgcactg
gcggcatataacctgggttatggccatatgctggatgcgcgcaaactgaccaaaagtcag
aatggcaacccagacagttgggttgatgtcaaaatgcggctgcccatgttgagccagaag
cgctattacccgagcaccacttatggttatgctcgcggtcatgaagcttataactatgta
gaaaacatccgccgctatcaggacagtttggtggggtatttgcaggagaaagagaaaaaa
gccgcccaacatgccgctattgaagctgaactgggcaaagcttatcccgttatcggcccc
ggctggtcaatcaataattag
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