Yersinia rohdei: CH64_1956
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Entry
CH64_1956 CDS
T03610
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
yro
Yersinia rohdei
Pathway
yro02020
Two-component system
yro02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CH64_1956
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CH64_1956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yro03021
]
CH64_1956
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
yro02035
]
CH64_1956
Transcription machinery [BR:
yro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CH64_1956
Bacterial motility proteins [BR:
yro02035
]
Flagellar system
Flagellar assembly proteins
Stator
CH64_1956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
LexA_DNA_bind
PF0610-like_N
HTH_Mga
HTH_38
HTH_23
GerE
UPF0175
Phage_antitermQ
Clr5
Motif
Other DBs
NCBI-ProteinID:
AJJ10093
UniProt:
A0A0U1HXZ7
LinkDB
All DBs
Position
complement(2175388..2176074)
Genome browser
AA seq
228 aa
AA seq
DB search
MNINDNLALTPVEESQYLTAYLPLVKRIVRQLSFQVNSVIDREDMQQIALMGLLEALRRY
GHPDVQFAAYAVHRIRGAVLDQLREHDWRPRRLRQKTHKINEAIRAIMRKLGHEPSFEEI
TAELKLTAEEYQEYLLLESASAMESLDDILSLETPTDALQSRNLEDSIIVEDNLNQAIAS
LEEREQMILHLYYQKEMSMKEIAEVLDLTEARICQLNKKIVQKIKSFF
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaacgataatttagcgctaacaccggtagaagaaagccaatatctgaccgcg
tatttaccactggtaaaacgtattgtcagacaactttcattccaggtgaatagtgttatc
gacagggaggatatgcagcaaattgcactgatggggttattagaggcattacgccgctat
ggtcaccctgacgtgcagtttgctgcctatgctgttcatcgaatccgtggtgcggtgctg
gatcaactgcgtgagcatgactggcggccacgtagattaaggcagaaaacgcataaaatt
aatgaagctattcgcgcgataatgcgcaaattgggtcatgaaccgagttttgaggaaatt
actgcagagctaaaactgacggcagaagaatatcaagaatatttattattggagagtgcc
agtgcaatggaaagcctggacgatattctgtcattagaaacgccaaccgatgcgctacaa
agccggaatttagaagacagtattattgttgaagataatcttaatcaggccatcgcctca
ttggaagagcgcgagcaaatgattttgcatctttattatcagaaagaaatgagcatgaaa
gaaattgctgaagtattagatcttactgaagcacgaatttgtcaactgaataaaaaaatc
gtacaaaaaattaaatcatttttttaa
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