KEGG   Yersinia rohdei: CH64_2194
Entry
CH64_2194         CDS       T03610                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
yro  Yersinia rohdei
Pathway
yro02020  Two-component system
yro02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:yro00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CH64_2194 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CH64_2194 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:yro03021]
    CH64_2194 (rpoN)
Transcription machinery [BR:yro03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CH64_2194 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AJJ12763
UniProt: A0A0U1HNH2
LinkDB
Position
2442408..2443841
AA seq 477 aa
MKQGLQLKFSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHEEIETKE
TPDSESLDTREALEQKDMPEELPLDATWDEIYTAGTPSGMSNDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFSETDAAIATSIVDAVDETGYLTVPLEDILESMGNENVALDEVEAVLK
RIQHFDPIGVAARNLRECLLVQLSQYAKDTPYLAEARLVISEYLDLLGNHDFRTMIRLSR
LKEDTLKEAIALIQSLDPRPGQSINTGESEYVIPDVLVHKDKGRWTVELNADSIPRLKIN
QQYAAMGNNTRNDSDGQFIRSNLQEAKWLIKSLESRNETLLKVARCIVEQQVAFFENGPE
FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLVAAENPAKPLSDSKLTTLLCEQGIMVARRTVAKYRESLSIPPSNQRKQLI
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactcaagttcagccaacaactggcaatgactccccagctacag
caggctattcgcctattgcagctttctacgcttgaactccagcaggagattcaacttgcg
ctggagagtaaccccctgcttgagcaaactgatcttcatgaagaaatagagacaaaagaa
acgccagacagtgaatcgctcgatacccgcgaagcactggaacaaaaagatatgccggaa
gaattgccactggatgccacttgggatgaaatttataccgcaggcacgccatcaggaatg
agcaatgattacagtgatgatgaactgccggtctatcaaggggaaaccacccaaactctg
caagactatctcatgtggcaagtggatttgaccccattttcagagactgacgcggccatt
gcgacctctattgtcgatgcagtcgatgaaactggctatctcaccgtcccgctagaagac
atcctcgagagcatgggtaatgagaacgtcgcactcgacgaagtagaagccgtgctcaag
cggatacagcactttgatcctattggagttgctgctcgcaatttgcgcgaatgtctattg
gtgcagttgtcacaatatgctaaagataccccttatcttgctgaagcgcgcttagtcatt
agcgaatatctggatttgctaggcaaccatgatttccgcactatgatccgcttaagtcgg
ctaaaagaagatacacttaaagaagcgatcgccctgattcaatcgctagatccccgccct
ggtcaatcgatcaataccggggagtcagaatatgtcattccagatgttctggtacataaa
gacaaagggcgctggacggtcgagctgaatgccgatagcattccacgcctgaaaattaac
cagcagtatgcagcaatgggtaacaatacccgcaatgatagcgacgggcagtttatccgc
agcaatctgcaagaagcaaaatggttgataaaaagccttgaaagccgcaatgaaacgctg
ttgaaagtggcgcgttgcattgttgaacagcaagtggcattttttgaaaatggcccagaa
tttatgaagcccatggtactggcagacattgctcaggctgtggatatgcatgaatcgaca
atttcccgcgtgactacgcagaaattcctgcacagtccccggggtattttcgagctgaaa
tatttcttctccagccacgtcaataccgatagcggaggtgaagcttcctctaccgcaatt
cgtgcactggtgaaaaaattggttgcggcagaaaaccctgccaaaccactgagtgacagt
aagctgaccacactattatgtgaacaaggcattatggtggcacggcgaaccgtcgctaag
taccgagagtcgttatccatcccgccgtcaaatcagcgtaaacagttgatttga

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