Yersinia rohdei: CH64_2194
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Entry
CH64_2194 CDS
T03610
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
yro
Yersinia rohdei
Pathway
yro02020
Two-component system
yro02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CH64_2194 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CH64_2194 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yro03021
]
CH64_2194 (rpoN)
Transcription machinery [BR:
yro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CH64_2194 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AJJ12763
UniProt:
A0A0U1HNH2
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All DBs
Position
2442408..2443841
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AA seq
477 aa
AA seq
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MKQGLQLKFSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHEEIETKE
TPDSESLDTREALEQKDMPEELPLDATWDEIYTAGTPSGMSNDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFSETDAAIATSIVDAVDETGYLTVPLEDILESMGNENVALDEVEAVLK
RIQHFDPIGVAARNLRECLLVQLSQYAKDTPYLAEARLVISEYLDLLGNHDFRTMIRLSR
LKEDTLKEAIALIQSLDPRPGQSINTGESEYVIPDVLVHKDKGRWTVELNADSIPRLKIN
QQYAAMGNNTRNDSDGQFIRSNLQEAKWLIKSLESRNETLLKVARCIVEQQVAFFENGPE
FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLVAAENPAKPLSDSKLTTLLCEQGIMVARRTVAKYRESLSIPPSNQRKQLI
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaagttcagccaacaactggcaatgactccccagctacag
caggctattcgcctattgcagctttctacgcttgaactccagcaggagattcaacttgcg
ctggagagtaaccccctgcttgagcaaactgatcttcatgaagaaatagagacaaaagaa
acgccagacagtgaatcgctcgatacccgcgaagcactggaacaaaaagatatgccggaa
gaattgccactggatgccacttgggatgaaatttataccgcaggcacgccatcaggaatg
agcaatgattacagtgatgatgaactgccggtctatcaaggggaaaccacccaaactctg
caagactatctcatgtggcaagtggatttgaccccattttcagagactgacgcggccatt
gcgacctctattgtcgatgcagtcgatgaaactggctatctcaccgtcccgctagaagac
atcctcgagagcatgggtaatgagaacgtcgcactcgacgaagtagaagccgtgctcaag
cggatacagcactttgatcctattggagttgctgctcgcaatttgcgcgaatgtctattg
gtgcagttgtcacaatatgctaaagataccccttatcttgctgaagcgcgcttagtcatt
agcgaatatctggatttgctaggcaaccatgatttccgcactatgatccgcttaagtcgg
ctaaaagaagatacacttaaagaagcgatcgccctgattcaatcgctagatccccgccct
ggtcaatcgatcaataccggggagtcagaatatgtcattccagatgttctggtacataaa
gacaaagggcgctggacggtcgagctgaatgccgatagcattccacgcctgaaaattaac
cagcagtatgcagcaatgggtaacaatacccgcaatgatagcgacgggcagtttatccgc
agcaatctgcaagaagcaaaatggttgataaaaagccttgaaagccgcaatgaaacgctg
ttgaaagtggcgcgttgcattgttgaacagcaagtggcattttttgaaaatggcccagaa
tttatgaagcccatggtactggcagacattgctcaggctgtggatatgcatgaatcgaca
atttcccgcgtgactacgcagaaattcctgcacagtccccggggtattttcgagctgaaa
tatttcttctccagccacgtcaataccgatagcggaggtgaagcttcctctaccgcaatt
cgtgcactggtgaaaaaattggttgcggcagaaaaccctgccaaaccactgagtgacagt
aagctgaccacactattatgtgaacaaggcattatggtggcacggcgaaccgtcgctaag
taccgagagtcgttatccatcccgccgtcaaatcagcgtaaacagttgatttga
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integrated database retrieval system