Yersinia rohdei: CH64_2205
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Entry
CH64_2205 CDS
T03610
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yro03000
]
CH64_2205 (treR)
Transcription factors [BR:
yro03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CH64_2205 (treR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
Peripla_BP_4
HTH_31
HTH_23
HTH_IclR
MarR_2
HTH_7
CENP-B_N
HTH_Tnp_ISL3
HTH_Crp_2
MarR
SpoIIID
TrmB
HTH_AraC
AAA_18
HTH_24
HTH_26
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AJJ11669
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Position
complement(2452136..2453083)
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AA seq
315 aa
AA seq
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MQNRLTIKDIARMSGVGKSTVSRVLNNEGSVSPQTRERVEAVIRQQGFTPSKSARAMRGQ
SDKVVGIIVSRLDSPSENQAVRTMLPLFYQQGYDPILMESQFDPALVSEHLHILRQRHVD
GVILFGFTGLTTEMLTPWQDKMVVMAREYTGFSSVCYDDEGAVRLLMDKLRQAGHRHISY
IGVQPTDATTGLRRHQSYLDYSQQHGLSPTVALGELSYQSGFQLAAQVIKPDTSALVCAS
DTIALGVSKYLQQQGQQHIQVCGIGNTPLLHFLFPNSLSVELGYGSAGVKAAQQLLEQLN
NNKEIQQIIIPGQLV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccgtttgaccattaaggatattgcccgcatgagtggagttggaaaatccacg
gtttcgcgggtattgaataatgaaggcagtgtcagcccgcagacccgtgagcgggttgag
gctgttattcgccagcagggctttaccccctcaaaatccgcccgggcgatgcgcgggcag
agtgataaagtggtggggattattgtttcgcgactggattcgccgtctgaaaatcaggcg
gtgcgcaccatgctgccgctgttctatcagcaagggtatgaccctattttgatggagagc
cagtttgacccggcgttagtaagtgagcacttgcatattttgcggcagcgccatgttgat
ggtgtaattttgtttggtttcactgggttaaccacagaaatgctcacgccgtggcaggac
aaaatggtggtgatggcgcgggaatatactggtttttcttctgtttgttatgacgatgaa
ggggcggtgcggctgttgatggacaaactccgtcaggccgggcatcgccatattagctat
atcggtgtgcagcccacggacgccaccaccggcttgcgccgtcaccaatcttatctcgat
tacagccaacagcacggcctgagccccacagtggcattgggcgagttgagttatcagagt
ggcttccaattagcggcacaagtgataaaaccagacacctcggcgctggtctgtgcctct
gataccatagctcttggggtaagtaagtacttacagcagcaggggcaacaacacatccag
gtgtgtggtatcggcaatactcctctgttgcatttcttgttccctaatagcctgtcagtc
gagctgggttatggcagtgcaggggttaaagctgcgcagcaactgcttgaacaacttaat
aataataaagaaattcagcaaattattatccccggccagctggtttaa
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