Yersinia rohdei: CH64_2319
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Entry
CH64_2319 CDS
T03610
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
yro
Yersinia rohdei
Pathway
yro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CH64_2319 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yro03021
]
CH64_2319 (rpoA)
03400 DNA repair and recombination proteins [BR:
yro03400
]
CH64_2319 (rpoA)
Enzymes [BR:
yro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CH64_2319 (rpoA)
Transcription machinery [BR:
yro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CH64_2319 (rpoA)
DNA repair and recombination proteins [BR:
yro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CH64_2319 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AJJ11741
UniProt:
A0A0U1HXV6
LinkDB
All DBs
Position
complement(2581818..2582810)
Genome browser
AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADNE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccgttagagcgtggctttggccatactctcggc
aatgcactgcgccgtattctgctttcatctatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggcgtacaggaagatatcctggag
atcctgctcaacctgaaagggctggcggtgagagttcagggcaaagatgaagttattctt
accctgaataaatctggcattggccctgtgactgcagccgatatcacccatgatggtgat
gtcgaaatcgtcaagccgcagcacgttatctgccacctgaccgatgaaaacgcatctatt
agtatgcgtatcaaagttcaacgtggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccgattggtcgtctgttagtagacgcatgctatagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ttggttatcgagatggaaaccaatggtacgatcgatcctgaagaggcgatccgccgtgcg
gcaactatcttggctgaacagcttgaagctttcgttgacctacgtgatgtacgtcagccg
gaagttaaagaagagaagccagagtttgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagctgttgaaaacgccgaacctgggtaaaaaatctctt
actgagattaaagacgtgctcgcatcacgtggtctttctttaggcatgcgcctagaaaat
tggccaccggctagcattgctgacaacgagtaa
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