Yersinia rohdei: CH64_2497
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Entry
CH64_2497 CDS
T03610
Name
(GenBank) helix-turn-helix domain protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yro03000
]
CH64_2497
Transcription factors [BR:
yro03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CH64_2497
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_AraC
HTH_18
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AJJ09585
UniProt:
A0A0U1HQ38
LinkDB
All DBs
Position
complement(2778070..2779263)
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AA seq
397 aa
AA seq
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MFEKRYRITLLFNANKVYDRQVVEGVGEYLQASQCDWDIFIEEDFRCRIDNIRDWLGDGV
IADFDDRQIEQLLANVDVPIIGVGGSYHQAEDYPPVDYIATDNAALVEAAFMHLKEKGLN
RFAFYGLPASSDKRWAQEREYAFRQLVAAEQYQGVVYQGMATAPDNWQYTQNRLADWVQT
LPHQTGIIAVTDARARHLLQVCEHLDIAVPEKLSVIGIDNEELTRYLSRVALSSVVQGTR
QMGYRAAKLLHQRLNQRQKQQESPPLQRILVPPVKVMARRSTDFRSLRDPAVIQAMHYIR
HHACKGIKVEQVLDAVGMSRSNLEKRFKDDIGQTIHGVIHEEKLDRARNLLSATSLPINE
ISQMCGYPSLQYFYSVFKKGYSITPKEHRDKYGEVSY
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaaacgctaccgaataaccttgctatttaatgctaacaaagtgtacgaccgg
caagtggtggaaggggttggcgagtatttacaagcttcacaatgcgactgggatattttt
attgaagaagatttccgctgccgtatcgataacatcagggattggttgggggatggtgtt
attgcagattttgatgatcggcagatagagcaattactggcaaatgttgatgtcccgatt
attggcgtgggggggtcttatcatcaagcagaagattatccgccagtagattatatcgcc
accgacaatgcggctttggtcgaagccgcttttatgcatttgaaagaaaagggtttaaat
cgttttgctttctacgggctacctgccagtagtgacaagcgctgggcgcaggagcgggaa
tatgcgtttcgacaattagttgcagcggaacaatatcagggcgttgtttatcagggaatg
gccaccgccccggataactggcaatacacccaaaatcggctggcagattgggtacaaact
ctaccgcaccagacaggaattatcgccgtgaccgatgctcgagcgcgccatttattgcag
gtctgcgagcatttggatattgcagtgcccgagaaattgagtgtgattggcattgataat
gaagaattaacccgctatttatcccgagtggcgctttcgtcggtcgtgcagggcaccagg
cagatgggttatcgggctgccaagttactgcatcagcgccttaatcagcgccagaaacaa
caagaatccccgccattgcagcgcattttggtgccaccggtcaaagtgatggccaggcgc
tccacggatttccgctcattacgtgatcctgcggtgattcaggccatgcactatattcgc
catcatgcttgtaagggaattaaagtcgaacaggtattggatgcagtgggcatgtcgcgc
tcaaatttggaaaaacgctttaaagatgacattgggcagacaattcatggggttattcat
gaagaaaaactcgatcgggcgcgcaatttattgtctgcaacgtcattgcctatcaatgaa
atctcgcaaatgtgtggctatccctcattacaatatttctattcagtattcaaaaaaggc
tattccatcaccccgaaagaacaccgtgataaatatggagaagtcagctattag
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