Yersinia rohdei: CH64_2547
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Entry
CH64_2547 CDS
T03610
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yro03032
]
CH64_2547 (gyrB)
03400 DNA repair and recombination proteins [BR:
yro03400
]
CH64_2547 (gyrB)
Enzymes [BR:
yro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CH64_2547 (gyrB)
DNA replication proteins [BR:
yro03032
]
Prokaryotic type
DNA Topoisomerases
CH64_2547 (gyrB)
DNA repair and recombination proteins [BR:
yro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CH64_2547 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AJJ11576
UniProt:
A0A0U1HPV8
LinkDB
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Position
complement(2837197..2839611)
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AA seq
804 aa
AA seq
DB search
MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIV
VTIHSDNSVSVQDDGRGIPTGMHDEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELVIRREGKVHEQTYRMGVPQAPLKVVGETDQTGTTVRFWPSFQTFTNNT
EFQYEILAKRLRELSFLNSGVSIKLRDKRNDKEDHFHYEGGIKAFVEYLNKNKNPIHPKV
FYFSTMKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNSYMDKE
GYSKKAKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVETLMNEKLVEY
LLENPTDAKIVVGKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKKG
KQEQYIKDDDAMEQYQMTLALDGAALHINEHAPALSGEPLERLVTEHYSVQKTIARMERR
YPRALLNNLIYQPTLQEEELSNKEVVTQWIESLVALLNEKEQHGSSYSAVVRENRERQLF
EPILRIRTHGVDTDYELDFDFIHGGEYRKICLLGDKLRGLIEEGAFVERGERRVPVTSFE
GALDWLVKESRRGLAIQRYKGLGEMNPEQLWETTMDPEGRRMLRVMVKDAIAADQLFTTL
MGDAVEPRRAFIEENALRAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatacttatgactcctcaagtatcaaggtattaaaagggctggatgcagttcgt
aagcgtccgggcatgtatatcggtgatactgatgatggtaccggtctgcaccacatggta
ttcgaggttgtggacaacgctatcgacgaagccctcgctggccactgtaaagagattgtg
gtgaccattcattcggataactccgtttccgtacaggatgatggtcgcggtatcccaacc
ggtatgcatgacgaggaaggggtatcggccgctgaggtcatcatgaccgtcttgcatgct
ggcggtaaatttgacgataactcttataaagtttccggcggtttgcacggcgtgggtgtg
tcagttgttaacgccctgtctgaaaaactggagctggtgattcgccgtgaaggtaaagtt
cacgaacagacttacagaatgggtgtgccgcaggcaccgctgaaagttgtgggcgaaacc
gaccagaccgggacaactgtgcgcttctggccgagcttccagacgttcaccaataacacc
gaattccagtatgaaatcctggcaaaacgcctgcgtgagctgtcgttcctgaactccggg
gtttcaatcaaactgagagataaacgcaacgacaaagaagaccacttccattatgaaggc
ggtatcaaagcgtttgttgagtatctgaacaaaaacaaaaacccaatccacccgaaagtg
ttctatttctccaccatgaaagatgatatcggtgtagaagtggctttgcagtggaatgac
ggtttccaggaaaatatttactgtttcaccaacaatattccacagcgcgatggggggact
cacttagtgggtttccgtacggcaatgacccgtaccctgaacagctacatggataaagaa
ggctacagtaaaaaagcgaaaattagtgcgaccggtgatgatgcccgcgaaggcttgatt
gctgtggtttccgtgaaagtgccagaccctaaattctcctcacagaccaaagataaactg
gtttcttctgaggtgaaaacggcggttgaaacgctgatgaacgagaagctggttgagtat
ttgctggaaaacccaactgacgccaaaatcgttgtgggcaaaatcattgacgcggcccgt
gctcgtgaagctgcgcgcaaagcccgtgaaatgacccgccgtaaaggagcgttggactta
ggtggcttgccaggtaagttggctgactgtcaggaacgtgacccagcattgtccgaactc
tacttagtggaaggggactcagcgggcggctctgctaaacaaggccgtaaccgtaaaaat
caggccattttgccgctgaaaggtaaaatcctgaacgttgagaaagcgcgctttgataaa
atgctttcttcacaagaagtggcgacgctgatcactgcgctgggttgtggtattggtcgg
gatgaatacaatccggacaaactgcgctatcacagcatcattatcatgaccgatgccgac
gtggatggttctcacatccgcaccttgttgctgacattcttctaccgccagatgccggaa
attattgagcgtggtcatgtgtatatcgctcaaccgccattgtataaagtgaagaaaggc
aaacaagagcaatacatcaaagatgatgacgcgatggaacagtaccagatgacattggca
ttggatggggcggcactgcacatcaatgaacatgcgccggcactgtctggtgagccatta
gaaagattggttactgaacattacagtgtccagaaaaccatcgctcgaatggaacgccgt
tatccgcgtgctttgctgaataacttgatttaccagccgacactgcaagaagaagagtta
agcaataaagaggttgtgacgcagtggattgagtcactggtagccttgctgaatgaaaaa
gagcaacacggcagcagctacagcgctgtggtgcgcgaaaaccgtgaacgccaactgttc
gagccaattttacgtattcgtactcatggtgtggatactgattatgagctggactttgac
ttcattcacggtggcgagtatcgcaaaatctgtctgcttggcgacaaactgcgtggcctg
attgaagaaggtgcctttgtggaacgcggcgagcgccgtgtgccggtcaccagctttgaa
ggtgcgctggattggttggtgaaagagtcacgccgtggtttggccatccaacgctataaa
gggttgggtgagatgaacccagagcaattgtgggaaaccacgatggatccagaaggccgc
cgtatgctgcgggtgatggtgaaagatgctattgctgctgaccaactattcactaccctg
atgggtgatgcggttgaacctcgtcgtgcctttatcgaagagaatgcgctgcgcgcagcg
aatatcgatatctag
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