Yersinia rohdei: CH64_2617
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Entry
CH64_2617 CDS
T03610
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
yro
Yersinia rohdei
Pathway
yro03030
DNA replication
yro03410
Base excision repair
yro03420
Nucleotide excision repair
yro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH64_2617 (polA)
03410 Base excision repair
CH64_2617 (polA)
03420 Nucleotide excision repair
CH64_2617 (polA)
03440 Homologous recombination
CH64_2617 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yro03032
]
CH64_2617 (polA)
03400 DNA repair and recombination proteins [BR:
yro03400
]
CH64_2617 (polA)
Enzymes [BR:
yro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH64_2617 (polA)
DNA replication proteins [BR:
yro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CH64_2617 (polA)
DNA repair and recombination proteins [BR:
yro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CH64_2617 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CH64_2617 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Obc1_cap
Prok-E2_E
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AJJ12565
UniProt:
A0A0U1HVV6
LinkDB
All DBs
Position
2915809..2918607
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNGSGEPTGAMYGVLNMLRSLLLQYRPSHVAV
VFDAKGKTFRDEIFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLAVSGVEADDVIGT
LAQEAEKAGHAVLISTGDKDMAQLVTPNITLINTMNNAILGPQEVCEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDALFNNLDKIATLTFRGAKTMSAKLEQNK
DVAYLSYKLATIKTDVELDVTCDELTVSPPDDEQLHQLFSRYEFKRWLADVEAGKWLEGK
KERPTAQANNKYIVATEPAAAAEVTAVLSQDNYQTILDEQTLADWIERLKKAEVFAFDTE
TDGLDTLSSNLIGLSFAVAPGEAAYLPLAHDYLDAPAQLDRQWVLDTLKPLLEDEKALKV
GQNLKFDQSMLARYGIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYLNHKTITFEEIA
GKGKNQLTFNQIALEQAGPYAAEDADVTLQLHLVLWPKLQQSEGLKRVFQDIEMPLLPIL
SRIERTGVLIDQNILAAHSKELAIRLDELEKQAHELAGEPFNLASPKQLQVILYEKQQLP
ILKKTPGGAASTNEEVLAELALDYPLPKVIIEYRGLAKLKSTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAPKGYRIMAADYSQIELRIMAHL
SQDKGLLAAFAAGKDIHRATAAEVFGLPLEGVTTEQRRSAKAINFGLIYGMSAFGLARQL
NIPRGEAQRYMDLYFERYPGVLEYMERTRKQAADQGYVTTLDGRRLYLPDINSRNANRRK
AAEREAINAPMQGTAADIIKRAMIAVDAWLQQESAPLVRVIMQVHDELVFEVHETVLESA
EQKIRELMEQSMQLAVPLKVDVGVGDNWEQAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccattgatcctcgttgacggttcctcttacctctatcgt
gcttaccatgcctttccgccgctaaccaatggcagcggcgaaccaaccggcgcgatgtat
ggcgtgttgaacatgttgcgcagtctgttgctgcaatatcgtccaagccatgtggccgta
gttttcgatgctaaaggcaaaacttttcgtgatgaaatttttgccgaatataaatctcat
cgtccgccaatgcctgatgatttacgtgctcaaattgagccacttcaccaaatggttaag
gcgatggggctgcctttattagcggtttccggggttgaggccgatgatgttattggaact
ctggcgcaagaagctgaaaaagcaggtcatgcggtattaatcagtaccggcgataaagat
atggcgcaattagttacgccaaatattactcttattaatacaatgaataacgctatttta
gggccacaggaagtttgtgaaaaatatggcgttcctcctgagttaattatcgattttctg
gccttaatgggggattcctcagacaatattccgggcgtaccgggtgtgggtgagaaaacg
gctcaggctttattacaaggattgggtgggttagatgcgctgttcaataatttggataaa
atagccacgctgacattccgtggtgccaaaactatgtccgccaagttagagcagaataaa
gatgttgcctatctctcctataaattagccaccattaaaactgatgttgaattggatgta
acctgtgatgaactgaccgtctcaccaccagatgatgagcagctgcatcaattattcagc
cgttatgaatttaagcgctggcttgcggatgttgaagccggcaaatggctggaaggtaaa
aaagagcggccaacagcacaggctaataacaaatatattgtggcgacagaaccagccgct
gcggctgaagtcacggctgtgctatcacaagacaattatcaaactatcctcgatgagcag
actctggctgattggattgagcgccttaaaaaagcagaagtttttgcttttgatactgaa
actgacgggcttgataccctcagcagtaatttaattggcctttcctttgctgttgcgccg
ggtgaggcagcgtatttacccttagctcatgattatctggatgcgccggcacaacttgat
cgccaatgggttctcgatacactgaaaccgctgttggaagacgaaaaagcccttaaagtg
gggcagaacctcaagtttgaccaaagtatgttagcgcgttatggcattgacctgcgtggt
attgctttcgataccatgctggaatcttatgttttagacagtgtcgcgggccgacatgac
atggacagcttggcagagcgctatctcaaccataaaacgattacgtttgaagagatagcc
ggtaagggtaagaatcaactgacctttaaccaaattgcattagagcaagccgggccttat
gcagcagaagatgctgatgtcaccttgcaattgcatttggtcttgtggccgaaattacag
cagagtgaaggcctgaagcgggtattccaggacattgaaatgccactgttgccgattttg
tctcgaatcgagcgcaccggtgtattgattgaccaaaacatcttagcggcgcactcgaaa
gagctggctattcgtcttgatgagctggaaaaacaagcccatgaattagccggagagccg
ttcaatcttgcctcgcctaagcagttacaggtgattttgtatgaaaagcaacaattacct
attctgaagaaaactccaggtggcgcggcgtctaccaatgaagaagtgctggccgagtta
gcgctggattatcctctgccgaaggtcattattgaatatcgtggtttggcgaaactgaaa
agtacttacaccgataagttaccgctgatgattaatccggtttctggccgggtacatacg
tcttatcatcaagccgtcaccgcgactgggcgcttatcctctcgtgatcctaacctacaa
aatattccagtgagaaatgaagaagggcggcgtattcgtcaggcttttattgcgcccaaa
ggttaccgcatcatggccgccgactactcacaaattgagctgcgcatcatggcgcatcta
tcgcaggataaaggattgctggctgcatttgcagctggaaaagatattcaccgcgcgaca
gctgctgaagttttcggtttgccactggaaggggtgactaccgaacaacgccgcagcgcc
aaggccattaactttggtttgatttatggtatgagtgcgtttggtttggcgcgccaattg
aatattccccgtggggaagcgcagcgctatatggatctttactttgagcgctatcctggt
gtgttggaatatatggagcgcacgcgtaagcaagcggcggatcaaggttatgtcaccacg
ctggatgggcgtcgtctctatctaccggatatcaattcacgtaatgccaatcgccgtaaa
gctgcggaacgtgaggctatcaatgcgccaatgcaagggactgcggccgatattattaag
cgcgcaatgattgctgtagatgcttggttacagcaagaatcagcacctttggtgcgggtc
atcatgcaggtgcacgatgaattggtgtttgaggtgcatgaaactgtgttggaaagtgct
gagcagaagattcgtgagttgatggagcaaagcatgcaactggcagtgccattgaaggtg
gatgtcggtgttggcgataattgggaacaagcccactag
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