Yersinia rohdei: CH64_2643
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Entry
CH64_2643 CDS
T03610
Name
(GenBank) diguanylate cyclase domain protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
yro
Yersinia rohdei
Pathway
yro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH64_2643
Enzymes [BR:
yro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CH64_2643
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
RIP
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AJJ09824
UniProt:
A0A0U1HWD0
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All DBs
Position
complement(2949671..2951665)
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AA seq
664 aa
AA seq
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MFEDQDTSILNTYFGTPSPFWRLAFDSQALELSAIKETTNIAIPLNSVQTMKIRSLTGIT
ASLDIEIEIYGNPLHLHLVGRKINGKEWGGTASAYADTESVARDLVMGLSFAEQVVSEAN
SVIVILDKNGHVQRFNHLSEEYTGKKEQDVIGKNVYDLFMTAKEGASSRKNIEGFFQRGA
SYEVERWINTVKGKRLFLFRNKFVHSGSGKNERYLICSGTDITKERRAQERLRVLANTDM
ITGLPNRHAIHERINSAIQTRGDTSVGIIYLDLDNFKKVNDHYGHMFGDRLLKDVSLAIL
SCLVDNEMLARLGGDEFIVLVENATMQMLETTAQRILNRMKLPFRVGLIEVYTGCSIGIA
LCPEHGDTLENIIRSADTAMYTAKENGKQTYSIFSQQMNKKVSEYVWLDTNLRKALEQHQ
LKVFYQPKISTKTGKVHSVEALVRWQSPERGLIAPSEFISYAEESGLIRPLGKWVLQTSM
QQAVDWKKRGINLRIAVNVSARQLIDEAIVTSFIESLEASALEYSLVDVELTESCLIDDE
DAAINIMKQLRHLGAQVHLDDFGTGYSSLSQLARIPIDAIKLDQSFVRHIHNNLISQSLV
RAIIVVAEALHMRVIAEGVETKEEEEFLDSIGIDEKQGFLYAKPMPASELEHWLVIQHPH
LLLD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaagaccaagacacatcgatccttaatacttattttggtacccctagcccattt
tggcggctagcttttgatagtcaggctttagagttgtctgcgattaaagagacgactaac
attgccattcccctgaattcagttcaaacaatgaaaatccggagcttaaccggtattacg
gccagtttagacattgaaattgaaatttatggcaatcctcttcatttgcatctggtaggc
cgtaaaattaatggcaaagaatggggaggaacagcatctgcctatgcagacactgaatct
gtagcccgtgatttagtcatgggcctttcctttgcagaacaagtggtttctgaagccaac
tcagttattgtcatcctcgataaaaacggccacgtccaacgttttaaccaccttagcgag
gaatataccggtaaaaaagagcaagatgttataggaaaaaatgtctacgacttatttatg
acggccaaggaaggagcatcatcgcgtaaaaatattgaaggcttttttcagcgaggtgca
tcttatgaagttgaacgttggattaatactgtcaaagggaagcgtctctttttatttcgc
aacaaatttgttcatagtggcagcggaaaaaatgaacgttatcttatctgttccggaact
gatattaccaaagagagacgtgctcaagaacgactaagagtattggcaaataccgatatg
attactggtttgcccaaccgccatgcaattcatgaacgtattaatagcgccattcaaact
cgcggtgatacctccgtaggtattatttatctcgatctcgataacttcaaaaaagtgaat
gaccattatggtcatatgtttggtgatcggttactgaaggatgtttcgctagctatttta
agctgtctggttgataacgaaatgcttgcccgactaggtggcgatgagtttattgtgctg
gtcgaaaatgccaccatgcagatgcttgagaccacagcacagcggattcttaaccgcatg
aaattgccattccgtgtgggactgatcgaggtatataccggctgctcaattggcatagcg
ctatgcccagaacatggcgatactctcgaaaatattattcgcagtgcggataccgctatg
tacactgcaaaagaaaatggaaaacaaacctactccattttctcacaacagatgaacaag
aaagtatcagaatacgtttggctcgataccaatttgcgcaaagcgttagaacagcatcag
ttaaaagttttttaccaacctaaaatatccaccaaaacgggaaaagtgcatagtgtagaa
gcattagtccggtggcaatcgcctgaaagaggcttaattgccccttcggagtttatctca
tatgcagaagagtcagggttgattaggcccttgggaaaatgggtattgcagacatcaatg
cagcaggctgtagattggaaaaaacgcggtattaacctgcgtattgcggttaatgtttct
gcccgccaattaatcgacgaggctatcgtcaccagctttattgaatccctcgaggccagt
gcgctggaatatagcttagttgatgttgaattaaccgaaagttgtctaattgatgatgaa
gatgctgccatcaacatcatgaaacaactgcggcacttaggtgcgcaggttcatttggat
gattttggtactggctattcttcactttcccaattagcacgcattcctattgatgcaatt
aaactagatcaaagttttgttcgccatattcataacaatcttatttcacaatctctggtt
cgagccattatcgttgttgccgaggcacttcacatgcgagtgattgccgaaggagtagag
actaaagaggaagaggaattcctggattctattggcattgatgaaaaacagggttttctt
tatgccaaaccaatgcccgcgagtgaactggagcattggctggtaatacaacaccctcac
cttttactggattag
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