Yersinia rohdei: CH64_2757
Help
Entry
CH64_2757 CDS
T03610
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
yro
Yersinia rohdei
Pathway
yro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CH64_2757 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yro03021
]
CH64_2757 (rho)
03019 Messenger RNA biogenesis [BR:
yro03019
]
CH64_2757 (rho)
Transcription machinery [BR:
yro03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CH64_2757 (rho)
Messenger RNA biogenesis [BR:
yro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CH64_2757 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AJJ09131
UniProt:
A0A0U1HUG1
LinkDB
All DBs
Position
3080420..3081679
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSDLITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVAGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIATSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDF
NRSGTRKEELLTTTEELQKMWILRRILHPMGEIDAMEFLISKLATAKTNDQFFDNMRRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaacacgccggtttctgatctgataacacttggcgaaaat
atggggctggaaaacctagcccggatgcgtaaacaagatattattttctctattcttaag
cagcatgcgaaaagtggagaagatatcttcggtgacggtgtgttggagatattgcaggat
ggatttggtttcctccgttcagcagacagctcctacctcgccggccccgacgacatctac
gtatccccaagccaaattcgccgtttcaacctccgcactggtgataccgttgccggtaag
attcgtccacctaaagaaggtgagcgttattttgcactgttgaaagttaacgaagttaac
tatgacaagccggaaaacgcccgtaacaaaatcctgttcgaaaacttaaccccactacat
gccaactcccgtttgcgcatggaacgaggtaatggttcgactgaagatttaaccgctcgc
gtactagatttggcatcgccaatcggtcgcggtcaacgtggtcttattgtggctccgcca
aaagcgggtaaaaccatgctgttgcaaaatattgcgaccagcattgcttacaaccaccct
gattgcgtattgatggtattgctgattgacgagcgcccggaagaagtgaccgagatgcaa
cgtttggttaaaggcgaagttattgcttctacctttgacgaaccggcatctcgccacgtt
caagttgctgaaatggttatcgagaaagcgaaacgtctggttgaacataaaaaagacgtt
atcattttacttgactcgattactcgtttggcccgcgcctataacaccgtggtacctgct
tcaggcaaagtattgaccggtggtgtagatgctaacgccctgcatcgtcctaaacgtttc
tttggtgctgcacgtaatgttgaagagggcggtagcctgactatcattgccaccgcgttg
gttgataccggttctaaaatggatgaagttatctatgaagaatttaaaggtaccggcaac
atggaattgcatctgtcgcgcaaaatcgcagaaaaacgtgtgttcccagcgattgatttc
aatcgttctgggacacgtaaagaagagttgctgacgaccactgaagagctgcagaaaatg
tggatcttacgtcgtatccttcatccgatgggtgaaatcgatgcaatggagttcctcatc
agcaagctggcaacagcgaaaactaacgatcagttcttcgataatatgagacgctcgtaa
DBGET
integrated database retrieval system
