Yersinia rohdei: CH64_2787
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Entry
CH64_2787 CDS
T03610
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yro
Yersinia rohdei
Pathway
yro03420
Nucleotide excision repair
yro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CH64_2787 (uvrD)
03430 Mismatch repair
CH64_2787 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yro03400
]
CH64_2787 (uvrD)
Enzymes [BR:
yro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CH64_2787 (uvrD)
DNA repair and recombination proteins [BR:
yro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CH64_2787 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CH64_2787 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJJ10114
UniProt:
A0A0U1HUB6
LinkDB
All DBs
Position
3111402..3113564
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLLSVENASPYSIISV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSDDQL
RLLKRLVKALNLDEKQWPPRQAMWYINSKKDEGLRPQHIESYGNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRLLAGDR
ANVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILTAANALIAHN
DGRMGKNLWTEGAEGEPISLYCAFNELDEARFVVSRIKAWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFDRQEIKDALAYLRMISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQSTRALLQEKVLAGRAASALQRFVELVDSLAHETADMPLHIQ
TDRVIRDSGLWSMYEQEKGEKGQARVENLEELVNATRQYSYQDEDQDLTPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLCYAESRRLYGKEVNHRPSRFIGELPQECVEEVRLRATVSRPVNHRSMG
TPMNENDSGFLLGQRVRHPKFGEGTVVNLEGSGEHSRLQVAFPGEGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcgacagcctgaatgaaaaacaacgtgaagccgtggctgca
ccacgctgcaacctgttggtactggccggtgcgggcagtggtaaaacccgggtattggtt
catcgtatcgcctggctactgtcagtagaaaacgcttctccgtattcaattatttcggtg
acgtttaccaacaaagcggccgctgaaatgcgccaccgtattgagcacttgattggaacc
agccagggagggatgtggattgggactttccacgggctagcgcataggttgttacgcgct
caccatatggatgccaatctgccacaagatttccaaattcttgatagcgacgatcaactg
cggcttttaaaacgcttggttaaggccctgaatttagatgaaaagcaatggccgccgcgc
caggccatgtggtacatcaacagtaaaaaagatgaagggctgcgcccgcaacatattgaa
agctatggtaacccggtcgaagccacttggctgcgcatctatcaggcctatcaagaagcc
tgtgatcgcgcggggctggtagattttgccgagctgttattgcgcgcgcacgaactctgg
ttgaacaaaccgcatattcttaatcattatcgcgaacgttttaccaatattctggtggat
gagttccaggataccaacaatattcaatacgcctggatccgcctgctggcaggtgatcgt
gccaatgtcatgattgttggcgacgacgaccagtcgatttatggctggcgcggggcgcag
gtagaaaatatccagcgtttcttgaaagactttcccggcgctgaaaccatccgtctggag
caaaattaccgctcgaccagcaatatcctgaccgcagcgaatgcgctgattgcccataat
gatggccgcatgggaaaaaacctgtggactgaaggggccgaaggcgagcctatttcactg
tattgtgcatttaatgaattagatgaagcccgctttgtggtcagccgtattaaagcctgg
caagacaatggtggtgcgctgaatgattgcgccattttgtatcgcagcaacgcccaatcg
cgcgtgttggaagaagccttactacagaccgccatgccgtaccgtatttatggtggtcag
cgcttcttcgatcgccaagaaattaaagatgcattggcctatctgcgtatgatttccaat
cgcaatgatgatgcggcctttgagcgggtggtgaatacgccaacccgtggtattggcgac
cgcacgttagatgtggtgcgccagactgcccgcgaccgtcagttaaccttgtggcaatca
acgcgcgcgctgttacaggaaaaagtgctggcgggccgcgccgcttcggcactgcaacgt
tttgtcgagctggtggactcactggcccatgaaaccgcagatatgccactgcatatccaa
actgatcgcgtgattcgtgactctggtttgtggtcaatgtatgagcaagagaaaggcgaa
aaaggccaggcgcgtgttgaaaaccttgaagaactggtcaacgcgacccgccaatacagt
tatcaggatgaagatcaggatttgacgccgctacaggcatttctttctcatgctgccttg
gaagccggagagggccaagccgatgcctatcaggacgcggtgcagctgatgacgctccat
tcagctaaaggcttggaattcccgcaggtatttattgtgggcatggaagagggcatgttc
cctagccagatgtcactggatgaaggcgggcgtctggaagaagagcggcggctggcctat
gttggcgtgactcgtgcgatgcaaaaactgactctctgttatgccgaaagccgccgtctg
tatggcaaagaagttaatcaccggccatcacgttttattggcgagttgccgcaggaatgc
gtcgaagaagtgcggttgcgcgccacggtctcgcgcccggtaaatcaccgcagcatgggg
acgccgatgaacgaaaatgacagcggcttcttattgggccagcgggtgcgtcatcctaaa
tttggtgaaggcaccgtggttaatttggaaggaagtggcgaacacagccgattgcaggtg
gccttccccggtgaggggatcaagtggctggtcgcggcatatgccagactggaagccgtc
taa
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