Yersinia rohdei: CH64_2993
Help
Entry
CH64_2993 CDS
T03610
Name
(GenBank) mechanosensitive ion channel family protein
KO
K22051
miniconductance mechanosensitive channel
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yro02000
]
CH64_2993
Transporters [BR:
yro02000
]
Other transporters
Pores ion channels [TC:
1
]
CH64_2993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AJJ09434
UniProt:
A0A0U1HRL3
LinkDB
All DBs
Position
complement(3329152..3332565)
Genome browser
AA seq
1137 aa
AA seq
DB search
MHPIISWPFGKSLSFYKLMPFCKLMSCAKLISIGLLLSFITLLSLPLQAATQPNEDQLRQ
ELKQAEANKGMANQAEIVQALQGALSWLADAKESDIRAQQYQKAIDDFPKLTRELRQQLA
QEVDKPLPVPSNMSTSELEQQVLQISSQLLELNRLSQQEQDRAREISESLSQLPQQQSEA
RRILAEIGSRLQAQSSPTNPVTQAQFALLQAEAVARKAKANELELSQLSANNRQELSRLR
AELYKKRQERVDAQLQTLRNNLNNQRQQAAEKALERTELLAEQGGDLPESITQQLQINRE
LSQALNQQAQRIDLISSQQRQAVAQTQQVRQALSTIREQAQWLGVSTALGEALRAQVARL
PDVPKSQQLDRDMAQLRVQRLQYEDMLEKLQQQNTPLMQDDGAPLTTEQQRILDAQWRTQ
RELLNSLLSGYDTQILELTKLKVANSQLVDALSEVREATHRYLFWVADVSPISLSYPIYV
AHDLTRLLSLDTLSQLSGAFMMMMTSQETLLPIIGALLFVGFSISSRRHYHAFLERASSR
VGKVTQDHFSLTLRTVFWSILIALPLPVLWAAVGYGLQNAWSFPMAIAIGNAVTATVPVL
WIFMISAAFAHPHGLFITHFRWSPTQVGRAMRFYRLSVWLIVPLMMALITFENYNDREFA
GTLGRLCFILLCIALSLVTNSLKRAGIPLYLDKKGSGENIVNVALWALLLSAPLIAALAS
ALGYLTTSQALLARLETSVAIWFFLLVVYYIIRRWMLIQRRRIAFDRAKQRRADILAQRA
RGEEDIPHNNSTEGSIDVEEPVIDLDVISAQSLRLVRSILTMIALVSVIALWSEIHSAFG
FLENIRLWDSSSSINGIESVQAITMGSLLIAILVMIVTTQLVRNLPALLELALLQHLDLT
PGTGYAISTITKYLLILFGGLLGFSMLGIEWAKFQWLVAALGLGLGFGLQEIFANFVSGL
IILFEKPIRIGDTVTIRELTGSVTKINTRATTISDWDRKEIIVPNKAFITEQFINWSLSD
SITRVVLTVPAPAETSSEEVTEVLLTAARRCTLVLDNPPPEVYLVDLQQGIQIFELRIYA
AEMGHRMPLRHEIHQLILEGYREHGITLPFPPFQARLETLGRGRIVSSNRSRTPGSL
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
ttgcacccaatcatttcatggccttttggcaagtctctgtctttttataagctaatgcct
ttctgcaagctaatgtcatgtgccaaattaatctctattggcctattactgtcgtttatt
acgctgttgtccctgccgctacaagcagcaactcagcctaatgaagaccagttaagacaa
gagcttaaacaggctgaagccaataaagggatggccaatcaggcagaaattgttcaggcg
ctgcaaggggctcttagctggttagcggatgctaaagaatctgatatccgtgcccagcag
tatcaaaaagcgattgatgactttcctaagttgacgcgcgaactgcggcaacaattggcg
caggaagtggataaaccccttcccgtccccagtaatatgtccacatctgagcttgagcaa
caagtgctgcaaatcagtagccaattgttagagctgaaccgattgtctcaacaagagcag
gatcgcgcgcgggaaatcagtgaatctctcagccaactgccgcagcagcaatcagaagcc
cgccgcattctggcagaaattggctcacgccttcaggcacaaagtagccctaccaaccca
gtaacacaggcgcagtttgctctattacaagctgaagctgtggcccgcaaagccaaagcc
aatgagttagagctttcccagctttctgccaataatcggcaggaactgtcgcgattgcgt
gccgagttatacaaaaaacgtcaggaacgggtcgatgcccagctgcaaaccttgcgtaac
aatctgaataatcagcgccaacaagccgctgaaaaagcgcttgagcgaaccgagttgctg
gccgagcaaggcggtgacttacccgaatctattactcagcagttgcaaataaaccgcgag
ctgtctcaagcgctaaatcagcaagcacagcgtattgatcttatttcgtcacagcaacgt
caggcggtagctcagacacaacaagtccggcaggcactgagcactattcgtgaacaggcg
cagtggctgggtgtttcaaccgcattaggcgaagcgctgcgagcacaagttgccaggtta
cctgatgtgccaaaatcccagcaactggatcgtgatatggcccagctgcgggttcagcgt
ctgcaatatgaagatatgctggagaaattacagcaacagaataccccattaatgcaagac
gatggggcgccgctcaccactgaacaacagcggatcctcgatgcccaatggcgcacacag
cgggaattacttaactctttgctctcgggttatgacacccagattcttgaactgaccaag
ctgaaagtggctaatagccaattagtggatgcactgagcgaggttcgcgaagcgactcac
cgctatctgttttgggtcgcagatgttagcccgatatcactttcctatccgatttatgtt
gctcacgaccttacgcgtttattgtcgctagatacgctctcacagttgagtggggctttc
atgatgatgatgactagccaagaaacattactgccaattattggtgccctactgtttgtc
ggcttcagtatcagctctcgccgtcactatcatgcttttctggagcgcgccagcagccgg
gtgggcaaagttacgcaagaccatttctctctgacgttacgtaccgttttttggtcaatt
ctgatagcactgccactgcccgtcttatgggcggcggttggttatggattacaaaatgcc
tggtcatttccgatggctatcgccattggtaatgccgttactgcaacggtgccggtgtta
tggatatttatgatcagcgccgcattcgcgcacccgcatggcctgtttatcacccatttc
cgctggtcacctacccaagttgggcgggcaatgcgcttttatcgcttgtcagtgtggctg
attgtcccgctaatgatggcgctgattaccttcgagaattacaacgaccgcgaatttgcc
ggcacacttggtcggctatgctttatcttgctgtgtattgccttgagtttggtcactaac
agtctgaaacgtgccggtatcccgctctatttggataaaaaaggctctggggagaatatc
gttaacgtcgcgctctgggcgctactgttatctgcaccattgattgcggcattggcatca
gcactgggttatctcaccacctcacaggcgctgctggcgcggctggagacctcggttgcc
atctggttcttcctgctagtggtttactatattattcgccgttggatgctgattcagcgt
cgacgaattgctttcgaccgggccaaacagcggcgggccgatatcctggcacagcgtgct
cgtggcgaggaagatattccgcacaataacagcaccgaaggatccattgacgtagaagag
cctgtcattgatctggatgtgatcagcgcccagtccctgcggttagtgcgatcaattttg
acgatgatcgcattagtttcggtgatcgcattatggtctgagattcactccgcttttggt
ttcctggaaaacatccgcctgtgggattcgtcatcgagcattaatggcattgagtcggtg
caggctatcactatgggatcactgctgatcgccattttggtgatgattgttaccactcaa
ttggtgcgtaatttgcccgccttactggagctggcactgttacagcatttggatctgacg
ccaggaaccggctatgccatctcgactatcaccaagtatctgttgatcttgttcggtgga
ttgctcggtttctcgatgctggggatcgagtgggcgaaattccagtggctggttgctgca
ctcggtttaggtttgggttttggtttgcaggaaatttttgccaactttgtctccggcttg
ataattttgtttgaaaaaccgatccggattggcgataccgtgactatccgcgagctcacc
ggcagtgtcaccaaaattaatacccgagccaccactatctctgactgggatcgcaaagaa
attatcgtgccaaataaggcctttattactgagcaatttattaactggtcgttatcggat
tcaattacccgtgtggtgctgacggtaccggcaccggcagaaaccagcagtgaagaagtg
acagaagtattactgaccgcagcgcgccgctgtacgctggtattggataatccgccgccg
gaagtctatttggtcgacctgcaacaagggattcagattttcgaattgcgtatttacgcc
gccgaaatgggccatcgtatgccgctgcgccacgaaatccaccagctgattctggaaggt
taccgcgagcatggcattactctgccattcccaccattccaggcgcgtttggaaacgttg
gggcgtgggcgtattgtttcgtcaaaccgtagccgtacaccgggcagtttgtaa
DBGET
integrated database retrieval system
