Yersinia rohdei: CH64_3066
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Entry
CH64_3066 CDS
T03610
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yro03016
]
CH64_3066 (truB)
Enzymes [BR:
yro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CH64_3066 (truB)
Transfer RNA biogenesis [BR:
yro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CH64_3066 (truB)
Prokaryotic type
CH64_3066 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
CATSPERG_beta-prop
Motif
Other DBs
NCBI-ProteinID:
AJJ11171
UniProt:
A0A0U1HRI7
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All DBs
Position
3405985..3406974
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AA seq
329 aa
AA seq
DB search
MGRPRRRGRDINGILLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVVARLGQRTDTSDAEGALISEREINFTQAQLDAALDSFRGESQ
QVPSMYSALKHQGKPLYEYARQGIEVEREARSITVYELLFIRWEGDSLELEIHCSKGTYI
RTIIDDLGELLGCGAHVSYLRRLQVATYPSDRMVTLEQLTAMVETAQAENRSPNPELDLL
LLPMDSAVLNFPEVNLLPAVAAYVKQGQPVHVASAPSEGMVRITEGEEHNFIGIGTIAED
GRVAPKRLVVESVDVENTAVAKVVAGNMG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtccacgtcgtcgcggccgtgacattaacggcattctgttattggataagccg
ctgggcctctcctctaatgacgttttacaaaaagtaaaacgcctctttagcgctaaccgc
gcaggccatactggtgcgctcgatcctctggcgaccggtatgttgcctatttgtctgggt
gaagcgaccaagttttcccaatttttgctagattcagataaacgctatcgtgttgttgct
cgtttagggcaacgaactgatacttcggatgccgaaggtgcgttaatcagtgagcgggaa
attaactttactcaggctcagttagatgcagctttggacagtttccgtggcgagagccaa
caggtgccgtccatgtattctgcactgaagcatcagggtaagccgctgtatgaatatgcc
cgtcagggaattgaagtagaacgcgaagcgcgcagtattaccgtttacgaactgcttttt
atccgctgggaaggcgattctcttgagctggaaatccattgctctaagggaacgtatatt
cgcactattattgatgatttgggtgagttactgggttgcggcgcacatgtgagttatttg
cgtcggttacaggtggctacttatccaagtgatcgcatggtgactttagagcaactgact
gccatggtcgaaacggcacaggcagaaaatcgctcacctaatcctgaactggatttactg
ttattaccgatggacagtgcagtcttgaacttccctgaagttaatctgttaccggcagtc
gctgcgtatgtgaagcaagggcaaccagtacatgtcgccagtgcgccaagcgaaggcatg
gtgcgtatcactgaaggtgaagagcataatttcattggtattgggacaattgcagaagat
ggccgggtcgcacctaaacgtttggtcgttgaaagtgtggatgtggaaaacaccgctgtc
gcgaaggttgtagcaggaaacatggggtag
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