KEGG   Yersinia rohdei: CH64_3127
Entry
CH64_3127         CDS       T03610                                 
Symbol
clpV
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
yro  Yersinia rohdei
Pathway
yro03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yro00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CH64_3127 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yro02044]
    CH64_3127 (clpV)
Secretion system [BR:yro02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CH64_3127 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_7 Sigma54_activat AAA_22 AAA_14 ATPase_2 nSTAND3 NACHT AAA_25 Zeta_toxin IstB_IS21 AAA_30 TniB RuvB_N AAA_29 DUF815 StiP ABC_tran DUF2065
Other DBs
NCBI-ProteinID: AJJ09043
LinkDB
Position
3481623..3484280
AA seq 885 aa
MAITRKNLFGKLDATLFKGIESATTICKLRGNPYVELIHWVNQLWHQDDNDLKQIVRYFA
LNVEVIERDLAQALARLPTGATSISDFSYHIELAIERAWVYASLEYLDTRIRSSHLLLAM
LTNMELRRAFLAIVPEMEKIPLEQLTSDLSFITQASPEASEAATDGSPMYDGALPGEASN
AIGNKSHGTLAQYTTDLTALAREGKIDPVLGRDHEISTMVDILLRRRQNNPLLTGEAGVG
KTAVVEGLALAIAANKMPPALSQVSLLSLDIVALSAGASMKGEFEARLKNVLDEVIASEQ
PIILFIDEVHTLVGSGGNAGTGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTR
RFQVLQIDEPDENTAISMLRGLTPALEKHHGVWIMDEALQAAVRLSHRYIPARQLPDKAI
SLLDTACARVAVEQFSQPKELQQLIFQSETAQTELSSLEKAQHFGKEQGDRPQQLKAAII
EHSAAASELDQRWQAERELVAQITTTRAALYELVSEPAPNEEQRQKHQQQLAKLEEQLSQ
ARRALPLVQTEVNATVIASIVADWTGIPVGQMLKDDIRAVMELPQRLEERVIGQSHALVQ
LGENIMTARAGLSDPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNMITINMSEYQE
SHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHPDVHELFFQVFDKGQM
EDGEGRFIDFKNTILLLTSNVGSDLLSSLFADPDTAPEQDGILSALQPELLKVFPAAFLG
RVTVIPYLPLQPSALQHIVRLHLERIGSRLKSQHQLILQYSDAVVEDVVSHCSVAETGAR
MLIRYIEQNITSLISKFILQEQNMMPNQIVFVDKVESKFLVSMLN
NT seq 2658 nt   +upstreamnt  +downstreamnt
gtggctattacgagaaaaaaccttttcggcaaactggatgccactctttttaaaggtatt
gaaagtgcaacgacaatatgtaagttacgcggcaacccttatgtagagttaattcattgg
gttaaccagctttggcatcaggatgataatgaccttaaacagattgttcgttattttgct
ttaaacgtagaagttattgaacgcgatttggcccaagctctggctcgtctgcccacgggg
gcaactagcatctctgatttctcataccatattgaattggcaattgagcgagcttgggtc
tatgccagtttagaatatttagatacacgcattcgtagcagccatctgttactggcgatg
ctaacaaatatggaattacgtcgtgcatttttggcgattgtcccagaaatggaaaaaatt
ccactggagcaattaaccagcgacctgagtttcattacgcaggcttctccagaagcgagt
gaagcagcgacagatggtagcccgatgtatgacggcgcgttaccgggtgaagccagtaat
gccatcggcaataaaagtcatggaacattggctcaatacactaccgaccttaccgctctg
gcgcgtgaaggcaagatagacccagtgttagggcgtgatcatgaaatcagtacgatggtg
gatattttgctgcgtcgtcggcaaaacaacccactattgactggcgaagcaggggtagga
aaaaccgcagttgttgaaggcctggccttggctatcgcggcaaataagatgccaccggca
ttgagtcaggttagcttgttgtctttggatatcgttgcgctctctgcgggcgctagcatg
aaaggtgagtttgaagcgcgtttgaagaatgtgctggatgaagtcatagcttccgaacaa
cctatcattttgtttattgatgaagtgcatacgctggttggttctggtggtaatgccgga
acgggtgatgcggccaacttattgaagcctgctttggcgcgtggtcagctgcgaactatt
ggcgctacgacatggagcgagtttaagcgacacattgaaaaggatccggcacttactcgt
cgttttcaggtactccagattgatgagcctgatgagaatactgccatttcgatgttgcgc
ggcttgacgccagctttagagaaacaccatggtgtgtggattatggatgaagccttgcag
gcggcagttcgtttgtctcatcgctatattccagcacgccagttgccggataaagcgatt
agcctgcttgataccgcttgtgcacgagttgcggtagagcaattctcacagccaaaagag
ttgcaacagcttattttccagagtgagacggcacaaaccgagctttcatcattggaaaaa
gcccagcattttggcaaagaacagggtgatcgcccgcagcaattgaaggctgcaattatt
gagcattccgctgccgcaagtgagcttgaccagcgttggcaagccgagcgtgaactggtt
gcgcagataaccactaccagagctgcgctgtatgaacttgtttctgagccagcaccgaat
gaagagcaacgtcagaagcatcagcagcaactggctaaattagaagagcaattgtctcaa
gcacgtagagcattgcctttagtgcagactgaagtgaacgcaactgttattgccagtatt
gttgcggattggacgggtatcccagtcggacaaatgctaaaagacgatatacgtgcggtt
atggaattaccgcagcgtcttgaagaacgtgttattggtcagtcccatgcattagtgcaa
ttgggtgagaatatcatgacggcgcgtgcgggtttgtctgacccaagaaaaccgctgggt
gtttttatgctggttggcccttctggtgtcgggaaaacagagacagcgctggcaatagca
gaaagtatgtatggtggtgagcagaatatgatcactatcaatatgagtgaatatcaagag
tcgcatacagtttcatcactaaaaggttcgcctccgggctatgttggttatggtgagggt
ggtgtattaacggaagcagtacgtcgtaaaccttatagtgtggtgttattagacgaaatt
gaaaaagcacaccctgacgtgcatgaattatttttccaggtatttgataaaggtcaaatg
gaagatggtgaagggcgctttatcgatttcaaaaatactattttgctgttaaccagcaat
gtgggaagcgacttacttagcagtttgtttgctgatccagataccgcgccagagcaagat
ggaatactgagtgcattacaacctgaattgctaaaagtttttccagcagcatttttagga
cgtgtcacggtaattccttatttaccgctacaaccaagtgcattacagcatattgtaagg
ttgcatttggagcgtattggctcacggttgaagtcgcaacaccagctgatattgcaatat
agtgatgcggtggtagaggatgttgttagccattgttcggtggcagaaacaggtgctcgg
atgcttattcgttatattgagcagaatattacatcactcatcagcaagtttattctacag
gaacaaaatatgatgccaaatcagattgtttttgtagataaagttgaaagtaaattttta
gtatcaatgcttaactaa

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