Yersinia rohdei: CH64_3149
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Entry
CH64_3149 CDS
T03610
Name
(GenBank) lysM domain protein
KO
K13735
adhesin/invasin
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
CH64_3149
05100 Bacterial invasion of epithelial cells
CH64_3149
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Big_1
IAT_beta
Invasin_D3
CarboxypepD_reg
StcE_b-sandwich
LysM
Filamin
Glyco_hydro2_C5
SpaA
Glce_b_sandwich
Motif
Other DBs
NCBI-ProteinID:
AJJ12424
LinkDB
All DBs
Position
complement(3512867..3516835)
Genome browser
AA seq
1322 aa
AA seq
DB search
MTQPVLATNQNGLIARYAKPIAILNISIQIVFPLSLAFTPAMMAHAATNVQVIATEVYVF
LPGDTVQSVAEKNGLTVAELKKLNQLRKFSKPFEALTTGDEIDIPLIGNNFTTQSLPHST
SSPNDSLLAQSASQVGNTLQNNPNSEALNDLARSSALSAANAKAGQEISDWLNGKGKVRV
KLDADRDFSVKNSQLDLLVPLWESESHMIFSQGSVHRTDDRTQSNLGLGYRYFADSYALG
ANTFYDHDWSRSHSRLGLGAEYQRNFFKLATNGYLRLSNWKDSPDFDNYEERPANGWDIR
AEGYLPSYPGLGAKLAYEQYYGDNVGLFGKDNQQKNPHAITFGGNYSPFPLLKFSVDQRQ
GKGGQNDTRFGIDLNYTLGTPLSHQLDRNQLIASRSLIANRYDFVDRNNNIVLEYRKKNT
LSLKLAQQVSGYTGERKSLEVSVNSSNGLERIDWDAPELLSNGGQIIQEGPGLYSVIVPE
FQYGVGAANQYIVNATAYDNSGNASQQASTTVVVTASAVSTTHSEFTPTEIVLANDGQST
EQLTLVLRDNKGQPVIGVANDITMNITQSARTQPDVTVSKFTADPARPGYYLATLTAGMQ
TGVFILTPEIQNVKTTSATAILGETAILANGAVITLINDAAADGTATNEVQATVTNAFGK
PVPDAIVNFSASSNGVTVVTASATTDANGVASTNLTSTQAGSFTITAQVNGQSSNTQVTF
VADNNTAEIGSGALTVTANDALANGSAPNTVKAVITDAHGNLVSGAAVTFSAQSGVTVVT
ANATTDANGVASTNLTSTQAGSYTITALVNGQSSNVQVTFVADNNTAVIGSGALTVTAND
AAANGSAPNTVKAVITDAHGNLVSGAAVTFSAQTGVTVVTTNAMTDANGVASTNLTSTQA
GSYTITALVNGQSSNVQVTFVADNNTAVIGSGALTVTANDAAANGSAPNTVKAVITDAHG
NLVSGAAVTFSAQTGVTVVTANAMTDANGVATTNLTSTLAGSYTITALVNGQSSNVQVTF
IADSNTAVIGSGALTVTANDAVANGSATNTVQAVVTDAKGNLVSDVTVNFSAPADVGVVT
ANAMTDINGVATTNLTTTRAGASTITATINGKSQNTSVTFVPGAAVTAQSNLVASPTTIA
ANGTAASVLTLTLKDANGNMVSGQNVNFATSQTGSSVGNITDNNNGTYTARLVSTRTGSA
TLAASGSTTVTTTIDSNSFNIDLPVITLTRAYITQPVSNGNAITATTMTTALNKYESIYY
SFADGSWSGSVTLPASAEIGAAVKFESNAMQASTISYNSTSVSLTTGMTLNFLYNGSAWV
RS
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaccagtattagcaacaaatcagaacgggttaatagctcgatatgcgaagccc
attgccatattaaatattagtatccagattgtcttcccactcagcctggcctttactccg
gcgatgatggctcatgcagcgactaacgttcaagtcatagcgacagaagtctacgtcttt
ctacctggcgatacggtgcaaagtgttgcggaaaaaaatggactgaccgtagctgaacta
aaaaaactaaatcagttacgtaaattctcaaagccgtttgaagcactaacgaccggtgat
gaaattgacattcctcttataggaaacaattttactacccagagtttgccgcatagcacc
agcagcccaaatgactcgctattggcgcaaagcgctagtcaggtaggaaatactctgcaa
aacaacccaaacagtgaagcgctgaatgatctggcgcgatccagtgcgttaagcgccgcc
aacgccaaagcgggtcaagaaatatctgattggcttaatggtaaaggaaaagtccgtgtt
aagttggatgctgatcgggacttctcagtaaaaaattcacagctagatctgctcgtgcct
ctctgggaaagtgaatcacatatgattttctctcagggttcagttcatcgcacggacgac
cgtacccagtcgaatctcggcctgggttatcgctattttgccgatagctatgcgctgggt
gcaaatacattctatgaccacgactggtcgcgcagtcactcgcgcctggggctgggtgct
gaatatcagcgcaacttctttaagctggcgacgaatggctatttacgcctgtcgaattgg
aaagactctcctgactttgacaattatgaagagcgcccggccaatggctgggatattcgt
gcagaaggttacttaccatcttaccccggccttggcgctaaactggcctacgaacaatac
tatggcgataatgtcgggctatttggtaaagataatcagcagaaaaatcctcatgcgatt
acttttggtggaaactattcaccgttcccattgctgaaattcagtgtcgatcagcgccag
ggtaaaggtggccaaaatgatacccgatttggcattgaccttaattacacccttggcacg
ccattgtcacatcaacttgaccgcaaccaactgatagccagccgcagtcttatcgcaaat
cgctatgattttgtcgatcgtaataacaatattgttctggaatatcgtaagaaaaatacc
ctcagcctgaaactcgcccagcaagtgagtggttataccggtgaacgtaaatcactggaa
gtctcagtaaacagcagcaatgggctggagcgtattgactgggatgccccggaactgttg
agcaacggcggacaaattattcaagaagggccaggtctctacagcgtgattgtccctgag
ttccagtacggtgttggtgcagcgaaccagtacatcgtcaatgcgactgcctatgacaac
tctggtaatgcatcacagcaagcgagcactaccgtggtggtgacggcgtcggcggtcagt
acaactcacagcgaattcacacctactgaaattgttctagccaatgatggacagagcacc
gaacagttaacccttgttctacgcgataacaaaggccagccagttattggcgttgctaat
gacatcaccatgaacatcactcaatctgctcgcactcagccagatgtgacagtcagcaaa
tttacagctgatcctgcacggccgggctattacctggcaacattaacggcgggtatgcag
acgggcgtatttattctgacgccagagatccagaatgtaaaaacaacctccgccaccgcg
atacttggtgaaacagccatacttgccaacggtgctgttatcaccctaattaatgatgcc
gcggctgacggcacagcaaccaatgaagtacaagcgacggtaaccaatgcgttcggcaaa
cccgtccctgatgcaatagtcaatttcagtgccagcagtaatggcgtcaccgtggtcacc
gccagcgcgacgaccgatgccaatggtgtggcttccaccaacctgaccagtacacaggcc
ggcagctttactatcaccgcacaggtaaacggccagagcagcaacacgcaggtgactttt
gtcgccgacaacaatacggcagaaataggcagtggtgccctgacggtaacggctaatgat
gcgttggctaacggttccgcgcccaatacggtaaaagccgtgattactgatgcccacggc
aatctggtctccggcgcagccgtgacattcagtgcccagagcggtgtcaccgtggtcacc
gccaacgcgacgaccgatgccaatggcgtggcttccaccaacctgaccagtacgcaggcc
ggcagctataccatcaccgcactggtgaacggccagagcagcaatgtgcaggtgactttt
gtcgccgacaacaatacggccgtgataggcagtggtgccctgacggtaacggctaatgat
gctgctgctaacggctccgcgcccaatacggtaaaagccgtgattactgatgcccacggc
aatctggtttccggcgcagccgtgacattcagtgcccaaactggcgtcaccgtggtcacc
accaatgcgatgaccgatgccaatggcgtggcttccaccaacctgaccagtacgcaggcc
ggcagctataccatcaccgcactggtgaacggccagagcagcaatgtgcaggtgactttt
gtcgccgacaacaatacggccgtgataggcagtggtgccctgacggtaacggctaatgat
gctgctgctaacggctctgcgcccaatacggtaaaagccgtgattactgatgcccacggc
aatctggtctccggcgcagccgtgacattcagtgcccaaactggcgtcaccgtggtcacc
gccaacgcgatgaccgatgccaatggcgtggccaccaccaacctgaccagcacgctggcc
ggcagctataccatcaccgcactggtgaacggccagagcagcaatgtgcaggtgaccttt
atcgccgacagcaatacggccgtaataggcagtggtgccctgacggtaacggctaatgac
gctgtggctaacggttccgcgaccaatacggtgcaagccgtggtcactgatgccaaaggc
aacctggtatccgatgtgacagtgaacttcagcgctcccgcagacgtcggcgtggttaca
gccaatgcgatgaccgatatcaatggggtagcaacaacaaacctgactacaactcgtgcg
ggtgccagtacgataacggcaacgattaatggcaaaagccagaatacgagtgtgactttt
gttccaggcgcagcggtgacagctcaatccaacttagtggcatcgccaacgacgattgcg
gcgaatgggactgcggcttcagtactgacgttgacgcttaaagatgcgaacgggaatatg
gtgagcgggcaaaatgtcaactttgccacaagtcagacgggatcatcagttggcaatatt
acggataataacaatggtacttacaccgcgaggctagtcagtacgcgaacagggagtgcc
acactcgcagcgtcgggtagtacgacggtcacaacgacgattgatagcaacagttttaat
attgatttgcccgttataaccctgacgcgagcttatatcacccaacccgtctccaatggc
aatgcgattactgctacaactatgaccacagcgttaaataaatatgaatcaatatattat
tctttcgctgatggctcatggtctggaagtgtcacacttccggcgtcagcagagataggc
gctgcggttaaatttgagtctaatgctatgcaggccagtacgatatcgtataactctact
tctgtatccctaactacaggtatgacacttaacttcctttacaatgggagtgcctgggtt
aggtcataa
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