Yersinia rohdei: CH64_3161
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Entry
CH64_3161 CDS
T03610
Symbol
ccmA
Name
(GenBank) heme ABC exporter, ATP-binding protein CcmA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
yro
Yersinia rohdei
Pathway
yro02010
ABC transporters
yro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CH64_3161 (ccmA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH64_3161 (ccmA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yro02000
]
CH64_3161 (ccmA)
Transporters [BR:
yro02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
CH64_3161 (ccmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
RsgA_GTPase
MukB
AAA_23
AAA_30
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AJJ11632
UniProt:
A0A0U1HWQ8
LinkDB
All DBs
Position
complement(3528294..3529859)
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AA seq
521 aa
AA seq
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MSNTIPQLPPLLQVRGISKQFSGVVVLKSIDFTLQPGQVHALLGGNGAGKSTLMKIIAGV
LPPDSGTIEINGQPCLNLTPAKAHQLGIYLVPQEPMLFANLSVQENILFRLPKHQADKKK
MAQLLQSLGCHLDLAVSAGSLDVADQQLVEIMRGLMRDSRILILDEPTASLTPAETNRLF
NQISMLLQQGVGVVFISHKLPEIRQLADWVSVMRDGGIALSGATGDFSTDTIIQAITPQA
KNSELSDTQKLWLELPGNRRSQARSQSNQPVIRVTDLSGEGFAHISFEVRAGEILGLAGV
VGAGRTELAETLYGLRPASGGRVELEDIDITNMKTVNRLATGLVYLPEDRQASGLYLDAP
LSWNVCSLTQGNQGLWTHPAQEAAILERYRRALNIKFSHLEQPVRTLSGGNQQKLLIAKC
LEANPLLLIIDEPTRGVDVSARSDIYQLIRSIADQHVAIIFISSDLEEVVQMADSVLVMH
QGEISGALDRSAMNVDTIMHLAFGEHHTDADKTAENEGASC
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatactattccccagctgccaccgctgctccaggttcgtggtatcagcaaacag
ttttccggtgttgtggtactgaaaagcatcgattttactttgcaacccggccaggtacat
gccctgctcggggggaatggggcgggtaaatcaacactgatgaaaattatcgccggtgtg
ctgccaccggatagcggcaccattgagataaatggccagccctgccttaacctcacccca
gccaaagcccatcagttgggtatttatctggtgccgcaagagccaatgctgtttgccaat
ctgtcggtgcaggaaaatattctgttccggttgccaaaacatcaagctgacaaaaagaaa
atggcgcagttgctgcaaagtttgggttgccatctggatcttgccgtcagcgccggttca
ctggatgtggctgaccagcaattagtggagatcatgcgcggcctgatgcgcgactcgcga
attttgattcttgacgagcccaccgcctcactcacgccagcagaaaccaatcgtttattc
aaccaaataagcatgttattgcaacaaggggtcggcgtggtttttatctcccacaaactg
ccggaaattcgtcaactggccgattgggtcagtgtgatgcgcgatgggggcatcgcccta
agcggtgccactggcgatttctcaaccgacaccattattcaggcgattactccacaagcc
aaaaatagcgagttatcagacacccaaaaattatggctggagctgcccggcaaccgccgt
tctcaagctcgttctcaatctaatcaaccggttatacgggtgaccgatttgagcggcgaa
ggttttgctcatatttctttcgaggttcgcgccggtgaaattcttgggctggcgggggtc
gtgggggccggtagaaccgaattggcagaaactctatatggcttgcggcctgccagtggg
ggccgtgttgagctagaagatatcgacatcaccaacatgaaaaccgtcaatcgtctggca
accggcctggtttatctgccggaagaccggcaggcctctggcctttatctggatgccccg
ctgagctggaatgtctgctcactgacccagggtaatcaggggctatggactcatccggcg
caggaagcggcgattctggagcgctatcgtcgggcgctaaacatcaaatttagtcacctc
gaacagccggtgcgcactttatccggcggtaaccagcaaaaactgctgattgctaagtgt
ttggaagctaacccgttattactgattattgatgaacccactcgtggcgtggatgtatca
gcccgcagtgatatctatcaactgatccgcagtattgcggatcaacatgtggcgatcatt
ttcatctcatctgatctggaagaggtggtgcagatggcagacagcgtgttggtgatgcat
cagggggagataagtggcgcgctcgatcgcagtgccatgaatgtcgataccattatgcat
ttggccttcggtgaacatcataccgacgccgataagactgctgaaaacgagggcgcatca
tgttga
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