Yersinia rohdei: CH64_3174
Help
Entry
CH64_3174 CDS
T03610
Name
(GenBank) PAS fold family protein
KO
K05880
transcriptional activator for dhaKLM operon
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yro03000
]
CH64_3174
Transcription factors [BR:
yro03000
]
Prokaryotic type
Other transcription factors
Others
CH64_3174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
GAF
PAS_4
AAA_5
PAS_8
PAS_9
AAA_16
AAA_2
Mg_chelatase
PAS_7
AAA_7
Bac_DnaA
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AJJ12534
UniProt:
A0A0U1HWP0
LinkDB
All DBs
Position
complement(3549364..3551283)
Genome browser
AA seq
639 aa
AA seq
DB search
MSETEPAITPALTDSWQRCQKLMQAQQWRLPHRAVGATFQSICQRKNDLLVLGQAALEDA
YEYMESRHCVLLILDESGCTLWQCGHPHALSQLRELGIDCGSYWAEGLMGTNAPALAIAE
GHPIQVSGQQHFKQALHPWRFCATPVYDNSGRQRAVIVLGSLVDDNAASDLPLTLAIARE
IGNYLHTDTLLAENNRHLNELNALLDGVEDGVMAWDQRGCLLYLNRRAAAILQLDATRSL
GKPITDLLTLPALLTHAILSRHPLSHVEVTFENQQQFIPALLTLKPIPDGDHCSFIALLH
PQELLRQMVNNQLGRASYTFDAMPVASLEMRRLIRYGKQAAKGQHPILLHGEEGVGKQQL
GQAIHNASSRADGPYIVLNCQALPQNLMAREFLGSDASEGESGQPSKFELANGGTLYLEQ
VEYLSPEMQSALLQIVKTNMVMRMNSNRVIPVDVRIITATGADLPLLVKQGRFRRQLFYT
LQSFELHIPPLRQRQQDIPLLVQYTLASLGQHFHCQYQPDDSVIRQLCQYPWPGNDQELK
SVVERAAMACRNNRINLNDLPEHLLGEKLLLEPDMPQPQPVLSLQELERQAIIRAALVCQ
GQLNEMAVLLGIGRTTLWRKVKLHRLDIHQFKGGESLRV
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagacagagccggccataactcccgccctgacggactcttggcaacgttgccaa
aagctgatgcaagcccagcaatggcggctaccacaccgcgccgtaggggccactttccaa
tctatttgtcagcgaaaaaatgacttactggtgttaggccaggcggcattggaagatgct
tatgaatatatggaatcccgccattgcgtactcttaattctggatgaaagtggctgcacc
ctgtggcaatgcggccatccacacgccctaagccagctgcgagagttggggattgactgt
ggcagctactgggccgaggggttaatggggactaatgccccagccctggccatcgctgaa
ggacacccgatacaagtcagcggtcagcaacatttcaagcaggcgctgcatccgtggcgc
ttttgcgctactccggtctacgacaacagcggccgccagcgcgcggtcattgttttgggc
agcttagtggatgacaatgccgccagtgatttgccactgacattggccattgcccgagaa
attggcaattacctgcataccgacaccctattggccgaaaacaaccgccatctcaatgag
ctcaatgccctgcttgatggcgtggaagatggtgtgatggcatgggatcagcgcggttgt
ctgctgtacctcaatcggcgcgccgccgctattttacagctagatgcaacccgcagcctc
ggcaaacctatcacagatttactgactctccccgccttgttgacgcatgctattttgtcc
cgccatcctctgagccatgtggaggtgacctttgaaaatcagcagcaatttattccggca
ctattaaccctaaaacctattcctgatggcgaccattgcagttttattgctttgctgcac
ccacaagaattactgcggcaaatggttaataaccagttagggcgagccagttataccttt
gacgccatgccggtggcctcattagaaatgcgccgcttgattcgctatggcaaacaggcg
gccaaaggccagcaccctattttattacatggcgaagaaggggtcggaaagcaacagttg
gggcaggcaattcataatgccagcagccgtgccgatggcccttatatcgtattgaattgt
caggcattgccacaaaatcttatggcgcgggaatttcttggcagtgatgccagcgagggg
gaatccggccagcccagcaagtttgaattggctaatggcggcaccctctatctggaacaa
gtcgaatatttgtcaccagaaatgcagtcggcgctgttgcaaatcgtcaaaaccaacatg
gtcatgcgcatgaattccaatcgggttattccggtggatgtcaggatcattaccgccact
ggcgctgacctgcccttgctggtgaaacaagggcgctttcgccgccagttattctatacg
ttgcaatcttttgagctgcatattcccccattgcgccagcgccagcaggatattccgctg
ctggttcaatatactctggccagtctggggcagcatttccactgccagtatcaaccggat
gacagtgttatccgccagttatgccaatacccgtggccgggtaatgatcaagagctgaaa
agtgtggtagagcgcgccgcaatggcatgccggaataatcgcattaatctcaatgattta
cccgagcatttattgggagaaaaattgctactggaaccggacatgccgcaacctcagccc
gtcctatcactacaagaattagaaaggcaggctattattcgtgccgcactggtatgccaa
ggtcaattaaatgaaatggccgttttattaggaattggtcgcaccaccttatggcgaaaa
gtgaaactgcaccggttggatatccaccaatttaaaggcggcgagtcactgcgggtttaa
DBGET
integrated database retrieval system
