Yersinia rohdei: CH64_323
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Entry
CH64_323 CDS
T03610
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
yro
Yersinia rohdei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_16
TPR_11
TPR_2
Coatomer_E
TPR_7
TPR_6
TPR_1
Motif
Other DBs
NCBI-ProteinID:
AJJ09914
UniProt:
A0A0U1HSX2
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Position
366556..369024
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AA seq
822 aa
AA seq
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MYHTFTTLLRPLHRHRITLLALLISGLSVNPVLADTQYDALIIQARTGDTAPALDYLKTE
SKNRPLNSSQVDDWLQIAGWAGRDQEVIDVYERYHSSMNLSSRGLASAARAYRNEKRWDQ
ALALWQSSLKKDPTNPDLITGMIMTQADSGRGSEGLKQATELTERDPSAKNYMTLSYLNR
ATNHNYDALQASSEAVRLAPESEEVLKNHLEILQRNRIADPALQLARENPKLVTAEQFRQ
LERDAAAEQVRMAVLPTRSETERFYIADQALADYQDLLTRWSKDPEAQADYQRARIDRLG
ALLVRRNTAELIQEYETMEAEGYKMPDYARRWAASAYIDRRMPEKAAPILTSLYYADGKT
FRNSDDLLDADDLYYSLNESEQLDKAYQFAKNYSEQTPYQVAVYGLPGKEPNDDWMEGQT
LLVQSLVALNDLPAAQKKLETLSSTAPANQNLRIALASIYLARDLPRKAEQELKAVESLA
PRSLILERAQAETAMDLQEWRQMELLTDDVITRSPEDVPSQELDRQRKIHNMYELRMTGN
RTISSNSPVSGNKDYGIETLLYSRPIADNWRVFGGGSYNNAQFEEGTGINRVMRLGGEWT
SRDHWVEAEINNQNYGFGNKTGARLSTWYDFNDHWRVGGQVERLAKDTPLRAMKNNITAN
SASAFVFWKADDRRDAEFSVTPSDYSDGNKRWEYELNGRQRIWTGPYLTADFNLGLAAST
NTKEDVIYYNPKRDFTYLPAVTLNHIMYRRYKTVWSQQVQLGVGGYWEKNYGNGLVTTAS
YGQRVLWNDVVDTGVAITYDKRPYDGAREHDLSLAFDLNYRF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacacatttacgacactgctgcgcccgctgcatcggcacagaattactttatta
gcgttgttaatttccgggctttcagttaatccagttttggcggatacgcagtatgatgcg
ttaattatccaagccagaacgggagataccgcgccggcacttgattatttaaaaacagaa
tcaaaaaataggccgcttaatagcagtcaggttgatgattggctgcaaatagccggttgg
gccgggcgtgatcaggaggtgattgacgtttacgaaagataccattcctccatgaatctt
tcgtcgcgtggtttggcgtctgcggcacgtgcatatcgcaatgaaaaacgctgggatcaa
gcgctggcattgtggcaaagcagtttaaagaaagacccaactaatcctgaccttattacc
ggcatgattatgacgcaggccgattccggtcgcggtagtgaggggcttaaacaagccaca
gaattgaccgagcgtgacccttcggcaaaaaattacatgactttgtcttatctgaaccgt
gcaaccaatcataattatgatgccttgcaggcgtctagtgaggcggtgcggttggctcct
gagtctgaggaggtgttaaaaaaccacctcgagattttgcaaagaaatcggattgctgat
ccggcgttacagctggccagagaaaacccgaaattagtaacggcggaacagtttcggcaa
cttgaaagagatgcggcggctgagcaagtacgtatggcggtattgccaacgcgcagtgaa
actgaacgtttttatattgccgatcaggctctggcggattatcaggatttgttaacgcgc
tggagtaaagatcctgaggcgcaagctgattatcaacgcgcacggattgataggcttggc
gcattattagttcgccgcaatactgctgaactgattcaagaatatgaaactatggaagcc
gaaggctacaaaatgcctgactatgcccgtcgttgggcggcttcagcttatattgaccgc
cggatgccggaaaaagcagctcctatcctcaccagtttgtattatgccgatggtaaaact
ttccgtaacagtgatgatttgctggatgcggatgatctctattactcgctgaatgaaagt
gagcaattagataaagcttatcaatttgctaagaactatagcgagcaaacgccttatcag
gttgccgtctacggtttgccaggtaaagaacccaatgatgattggatggaaggccagacc
ttgctggttcaatctctggtggcacttaatgatctgccggcagcacagaaaaaactggaa
acgttatccagcactgcaccggctaaccagaatttacgtattgccttagccagtatttat
ctggccagagatttaccgcgtaaagctgaacaagaattaaaagcggtagaatcattggct
ccacgtagccttattctggaacgcgctcaagctgaaaccgcgatggatttgcaggaatgg
cgtcagatggaattgttaactgatgacgtgattacccgctcaccagaagatgtcccatcc
caagaattagatcggcagcgcaaaattcataatatgtatgaattgcgcatgacgggtaac
cgcaccatctcctctaatagtccagtcagtggcaataaggattatggcattgaaacgctg
ctgtatagccggccaattgctgataattggcgcgtatttggtggcggcagttataacaat
gctcaattcgaggaaggaaccggcattaaccgtgtgatgcgtttagggggcgaatggact
tcccgtgaccattgggttgaggccgaaataaataaccagaattatggttttggtaataaa
accggtgcgcggttgtcgacttggtatgattttaatgaccattggcgagtgggggggcag
gttgaaagattggcgaaagacacgccattgcgcgccatgaaaaataatatcactgccaat
agtgcttctgcgtttgttttctggaaagccgatgaccgccgtgatgccgagtttagtgtc
acgccatcagattactctgatggtaacaaacgttgggaatatgaactcaatgggcgtcag
cgcatctggactgggccttatctgaccgcagatttcaatttggggctggcggcaagcact
aacaccaaagaagatgtcatttattacaatccgaaaagagatttcacttaccttcctgca
gttactcttaatcatattatgtatcgtcgctataaaacggtctggagccagcaagtgcag
cttggtgtgggtggctattgggagaaaaactacggaaatggtctggtcaccacggcaagt
tatgggcaacgggttttgtggaatgatgtagtcgataccggcgtggccattacctatgat
aagcgcccctatgatggtgctcgtgagcatgatctctcactcgcgttcgatttgaattac
cgtttctaa
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