Yersinia rohdei: CH64_3535
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Entry
CH64_3535 CDS
T03610
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yro03400
]
CH64_3535 (sbcD)
DNA repair and recombination proteins [BR:
yro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CH64_3535 (sbcD)
Archaeal homologous recombinant proteins
CH64_3535 (sbcD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AJJ12225
LinkDB
All DBs
Position
complement(3982740..3983978)
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AA seq
412 aa
AA seq
DB search
MRIIHTSDWHLGQHFFTKSRAAEHQAFLHWLIKQIEENQIDALIVAGDIFDTGSPSSYAR
ELYNRFVVELQPTGCQLVVLGGNHDSVSTLNESRDLLSCLNTTVISSASSQLEQQVIILK
DRQHQPAAVLCAIPFLRPRDLVTSQAGESGGQKQLALQEAIAAHYQALYQHAVELRTELD
LPLPIIATGHLTTVGVATSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQQVAKTEH
IRYSGSPIALSFDELNKEKSVYLVEFSQQSLSSVTPLFIPQFQPMQLIKGDLQQIERQLS
EFAHHQGLPVWLDIEVATQDYLSDIQRRIQALTAELPVEVVLLRRSKEQRSNSIERQEKE
TLNELSVADVFERRLALEADLTEPRQQRMRQMFNQVVEDITQNTDLTPEQTI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcatacctctgactggcatttaggccaacacttcttcaccaaaagccgt
gcggccgaacatcaggcatttctgcactggctcattaagcagattgaagaaaatcagata
gatgcgctgattgtcgccggtgatatctttgatactggctccccatccagctatgcccga
gagctatataaccgttttgtcgtagaactccaacctactggctgccaattagttgtcttg
ggggggaatcacgactcagtatcgacactgaatgaatcacgggatttactttcctgtctg
aatactacagtaatttccagtgccagcagccaattggaacagcaagttattattctgaaa
gaccgtcaacatcaacctgccgcggtgctgtgtgccatccctttcttgcgcccacgcgat
ttagtgaccagccaggcgggtgaatctggcggacaaaagcaactggcattgcaagaagct
attgccgctcactatcaagcgctctatcagcatgctgtcgaactgcgtaccgagctagat
ttgcctttacctattattgctaccgggcacttgaccacggtcggcgttgccaccagtgat
tcggttcgtgatatttatattggcaccttggatgcttttccggcacaggcgttcccgcca
gcagattatattgctttgggccatatccaccgtgctcagcaggtcgctaaaactgagcat
atccgctacagcggctcaccaatagccttgagttttgatgagctgaataaagagaaaagt
gtctatctggtggagttttcccaacagtcgctatcatcagttaccccgctgtttattcct
caatttcaaccgatgcaattgattaaaggtgatttacagcaaatagagcgccaactatct
gaatttgctcaccatcagggcttaccggtgtggttagatattgaagtcgccactcaagac
tacttatcggatatccaaaggcgaattcaggcccttaccgccgaactccctgttgaagtg
gtgttactgcgccgcagtaaagaacagcgcagtaacagcattgaacggcaggaaaaagaa
acactcaatgagctaagtgttgccgacgtatttgaacgccggcttgcattggaagctgat
ttaaccgaaccgcgccaacagcgcatgcgccaaatgttcaatcaagttgttgaagatatt
acacaaaatacagatttaacaccggagcagacaatatga
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