Yersinia rohdei: CH64_3614
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Entry
CH64_3614 CDS
T03610
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
yro
Yersinia rohdei
Pathway
yro03030
DNA replication
yro03430
Mismatch repair
yro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH64_3614 (dnaX)
03430 Mismatch repair
CH64_3614 (dnaX)
03440 Homologous recombination
CH64_3614 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yro03032
]
CH64_3614 (dnaX)
03400 DNA repair and recombination proteins [BR:
yro03400
]
CH64_3614 (dnaX)
Enzymes [BR:
yro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH64_3614 (dnaX)
DNA replication proteins [BR:
yro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CH64_3614 (dnaX)
DNA repair and recombination proteins [BR:
yro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CH64_3614 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_2
AAA_18
AAA_30
ResIII
AAA_14
AAA_assoc_2
PIF1
AAA_16
AAA_7
TsaE
nSTAND3
Pneumo_att_G
Motif
Other DBs
NCBI-ProteinID:
AJJ12223
LinkDB
All DBs
Position
4070240..4072195
Genome browser
AA seq
651 aa
AA seq
DB search
MSYQVLARKWRPKTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGICANCQEIEQGRFVDLIEIDAASRTKVEDTRELLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKVIDV
EIIRAQLEKILLAEHISSDARALQLLARAADGSMRDALSLADQAIAMGDGHVTTATVSHM
LGTLDDEQPLAIIEALVSADGARVMAQIEQAASRGVDWENLLVETLSLLHRIAMVQLLPS
MLDNHYATIEPRLRELARTLPPADIQLYYQILLVGRKELAYAPDRRMGVEMTLLRALAFH
PKAIIAEPQIAPVNAPAAIANNTPAAQPMSAPAYAQDAPPPLGVAPQVNTQLPDSTAQLL
QARTQLLRQSGTTTPKKNEPAAPGKARPANSALERLASVTERSQQRLAAKSTEEKKPVKK
EAYRWIAQNEPEVSAEPVATPKALRTALEHEKTPELSAKLAEAAMERDPWAAEIDKLSIP
KLVQQLALNAFKEEKEAGNICLHLRSAQRHLNSPSAQSVLADALSELRGNAVTLSIVEDD
NLTERTPLEWRQAIYEEKLAQARQSIIADNNIQTLQRFFDAELDEESIRPV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtacttgcccgtaagtggcgtcccaaaacattcgcagacgttgttgga
caggaacatgttctgaccgcattagctaatggcctttcgttagggagaattcatcacgcc
tatttattctctggtactcggggggtaggtaaaacctctatcgctcggttgttagccaaa
ggcctgaactgcgaaacgggcattactgcgacaccttgtggtatttgtgctaattgtcag
gaaattgaacaaggccgttttgttgatcttatcgaaatagacgccgcctctcggacgaaa
gtagaagatacccgagagctgctggataatgttcaatatgctcccgcccgtggccgcttc
aaagtctaccttatcgatgaagttcatatgctgtcacggcacagtttcaatgcgttgctg
aaaacccttgaggagccgccagcacatgtgaaattcctgctggcgacgactgacccgcag
aaattgccggtgaccattctttcccgctgcttacagtttcatctcaaagttattgatgtt
gaaattattcgcgcgcagcttgaaaaaatactgctggccgaacacatcagcagtgatgcc
cgagccttgcaattattggcgagagccgctgatggcagcatgcgggatgcactcagtctg
gcggatcaggccatcgcgatgggggacggtcatgtgacgaccgccaccgtcagccacatg
ctgggaacgcttgatgacgagcaaccgctggcaattattgaagctttggttagtgccgat
ggcgcacgcgttatggctcagattgagcaagctgcatcacgcggtgtcgactgggaaaac
ctcttggtcgaaaccttgagtttgctgcatcgcattgcgatggtgcaattattgccctcg
atgctggataatcactatgccactattgaaccgcggctacgtgagctagctcgaacactg
ccgccagcggatatacagctgtattatcaaatattattggtagggcgcaaagagttggct
tacgcgcctgaccgccgcatgggggttgaaatgaccttattgcgggcattggcatttcat
cctaaagcaatcattgcagaaccccagattgcgccggtgaatgctccagcagcaatagcc
aataacacccccgctgcgcagccgatgtcagcccctgcctatgctcaggatgcgccgccc
ccattgggtgtcgcgccgcaggtgaatacccagctaccggattcaactgcgcaattgttg
caagcgcgtacgcagttattgcgacaatcggggacgaccacaccaaaaaagaatgagccg
gcagcgccaggaaaagcgcggccggcaaactcagctctggagcgactggcttcagtgact
gagcgcagccaacagcgcctggcggcgaaatccaccgaagaaaagaaaccggtgaagaaa
gaagcctatcgctggattgcgcaaaatgaacctgaggtatcagctgagccggttgctact
cctaaagcattgcgtaccgccttggagcatgaaaaaaccccggagctctcggctaaattg
gctgaagctgcgatggaaagagacccttgggcggcagaaatagataaattatcaatcccg
aaattggtgcagcaacttgcgctgaatgcatttaaagaagaaaaagaagcgggtaatatt
tgccttcacttgcgttctgcgcagcgccatttaaactcgccttcggcgcagagtgtactg
gctgatgcactgagtgaattacggggtaatgctgttacacttagcattgttgaagatgat
aatctaacggagcgtaccccgttagaatggcggcaggccatttatgaagaaaaactggca
caagcgcgccagtcaattattgcggataacaatattcagacattgcagcgcttttttgat
gctgaactggatgaagaaagtatccgaccggtttaa
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