Yersinia rohdei: CH64_3654
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Entry
CH64_3654 CDS
T03610
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
CH64_3654
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AJJ11891
LinkDB
All DBs
Position
complement(4116123..4122083)
Genome browser
AA seq
1986 aa
AA seq
DB search
MNNPLETFESIRDFYIAYLETAFRIGAPAIQKYRRELLEKQGTLCADLFLEPMPRYKDYG
LTISDLLDAPKGETWLPGFTIPQRAAFIDLCLGGLLPRDPMDTIKGRFKLYTHQLEMLKR
GVQPGMPGIVTSGTGSGKTESFLLPVFAQIAKEASQWSQSSELKSWQPWWSEPNAQPTFV
RDREASTSGRPKAVRALILYPMNALVEDQLVRMRRALDSDEAHKVMDSHFGGNRIFFGRY
TSATKVTGWLDHPRLRNDPKEKKRVAVKVTELRKYMQFADKTHKEAVYQGKRDEDDNLQF
NFPRPDGAEVLSRWEMQKTPPDILITNTSMLSTMLVREIDDPIFDQTQKWIEHDPNAYFY
LVLDELHLQRGTAGTEVSYLLKHLINRLGLDQPQHRHKLRILASSASLPVSGQEGNQSID
YLWGMFGQRGLTMNASAKDWKACIVDGKPEALVDISDYCCDLPAFCHSVEQLKSTEASII
WRDIARSLGCYRDEVTLEELAQHTVLLAARMLEKGCTDNKKSLRATAINSLATGLFGEHL
DARRGVSALIWIRTTVDRWQQWFEHPFPAHIILPRFRAHAFLRALEGLYVAPLPSPPKAN
KDEINQSLFADLTVESGLRYGDRLYEDKQRSRRVELLYCECCATLFLGGKPSAFSVTSHR
TELLPNDPDTEKLPEHAKSVMIERRSAEEYVLFMPTVDRFWPLGSEKLTDDDSFGKWREA
SYDPFTATITQPISPVKPLPETDIAGWFYSVPSGNFIPPKREQSSSKSPGSSLPFQCPAC
GTSYKYGKGKQSPIRGFRVGFAKTTQLLASTLMAELQKSGDQERLVTFSDSRQDAAKAAL
DLESGHHDDIRREILIGSLKELVADKCSHEKLLIRLDEVTKRKKALDIIDDLNKLSDEQE
KELNDLWKERKRIKETLLLPQADSVSLEAILENSPKAGKPLNRLLAKLVKAGIHPTDRTG
ITPVPDPSKHSENIKTFTWQQLFDKDHHNKWCWKAFPYYETDLDIARQEISRDLKELAGE
SVFSKTYFALEEAGWGYPCIPISENYSRKKLAIFDALLRVLADAYRVDPSQYRNPDNPDT
PWKTASAIPKRNRVYSFANSICHQSGGSVLDLLDEFLLLLEKTGHQGGIIDIGKVHFHLV
EPTSSFWRCSKCGRVHLHLGAKICTRCHALLPEIQYGEAGVLQKQNYLGKRILYSSGSHR
MRSEELTGMTENPAARLRRFKGILIADDDDILPTGLKNFEPDTELDRKARVIDVLSVTTT
MEVGVDIGDLRAVFQANMPPQRFNYQQRVGRAGRRGQAFAFVLTACRSKSHDLFYFRHPE
KITGDLPPPPFLTTKLEMICQRLVRKIWLVAAFKWLRQNTINSHQSWPVDEHRQKPDNHG
EFFQVDWLKVNWVTWQPRIRQALIATIRNRDEFAHVCMPDEQSFYHRIVQLLTPDNLIQD
IGAALNDDAMTGKGLAESLAERGQLPMYGMPTRTRLLQTRAIATGEDDIQFASMDRDLDI
AIQEFAPGKYLVQDKRRYLTAGYAGMLKRRYPKSIEFDSNANELGESRMMTACPVCHVWA
PINHEISECTACGAETEDAEQYQCYVPYGFITSLEDKSVKEDVDQTLTNASRVSIAEAYS
FSAVSDFYANVAIQLESQICLHRLNRGTYVDERWSGFNAAQGNLRVPFRNGGTYQPLTAN
RVWVDSQLLEADLLLKRRFTPLQESKTSFYLAAPKVTDLLALMVVNTPAGLQLQTQAFRA
AALSAAFIIVNYASKELLDIDPEEIEILEPRVQRLEDGRLAPILQMADRLVNGSGLCERL
QQIGTSGTPIILEIMKAIVSNKNDFPLKEFLDDSHREKCFQGCYYCLHRYGNQAYHGLLD
WRLGLDVIQLLLDENYDAGLNGDFSAPGIADWRENAQRLAKEAASLFNSEIRMVGHIPLI
GIGPQRWVAVTHPFWSSDGIFNANPELERLFLEWKLEKQTVSTFDLSRRMGAVMTKLKNP
ESNLGN
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgaataatccacttgaaacatttgaatcaattagagatttctacatcgcttatcttgaa
actgccttccgaatcggcgctccagctattcagaaatatcgtcgagaattacttgaaaaa
caagggacgttgtgtgcggatctatttttggagccaatgccccgatataaagactatggt
ttaactatcagtgatttgctggatgccccgaaaggggaaacatggctaccggggtttact
atcccgcaaagagctgcatttatcgatctctgtttgggcggccttttaccccgcgaccct
atggatacaatcaaagggcgttttaaactctatacccatcaattagaaatgttaaaacga
ggtgtgcaacccggaatgccgggtattgttacttcaggaacaggctccggtaaaacagaa
tctttcttactacctgtttttgctcaaattgctaaagaggcaagtcagtggtcgcaaagt
tctgagcttaaaagttggcaaccatggtggagtgagccaaacgcccaacctacctttgta
cgagatcgagaagcatccacttctgggcgccctaaagctgtgcgagcattaatcctctat
ccgatgaatgcgctggtagaagatcaattagtccgcatgcgccgagcactcgactctgat
gaagctcacaaagtgatggattctcattttggtgggaatcgtattttctttggtcgttat
actagtgcaacgaaagtaacgggatggttagatcaccctcggctacgtaatgatccaaaa
gagaaaaaacgtgtagctgttaaagtcactgaattacgtaaatacatgcaatttgctgat
aagacacataaagaggcggtgtatcaagggaaacgcgatgaggatgacaatttacagttc
aatttcccgagaccggatggggccgaagtgctcagccgttgggaaatgcaaaaaacgccg
ccagatattctcattaccaacaccagcatgctctcaactatgctggtgcgtgaaattgac
gatcctatatttgatcagactcaaaaatggattgaacatgacccaaacgcctatttttac
cttgtgctcgatgaactgcatctacagcgtggcacggcaggcactgaagtcagctatttg
cttaaacatttgatcaaccgtctggggttggatcaaccacaacataggcacaaattacga
atcctggcttcgagtgcttcgcttcccgtgagtggtcaggaaggtaatcaaagtatcgac
tatttgtggggtatgtttggtcaacgcggattaacaatgaatgccagtgcgaaggactgg
aaggcttgcattgtcgacggaaaacccgaagcactggttgatatatcggattattgttgt
gacctacccgcgttttgtcactcggttgagcaactaaagtcaacggaggcatctataata
tggcgcgatatagctcgtagtttgggatgctatcgtgacgaagttactttagaagaattg
gcgcagcatacggtcttattggctgccaggatgttggaaaaaggatgcactgataataaa
aaatctctacgtgcaaccgccatcaattcactggcaacaggcttgtttggagaacatctc
gatgcgcgtagaggagtcagtgcgctaatctggatacgcacgacggttgatcgttggcaa
cagtggtttgaacatccttttcctgctcacatcatactaccgcgtttccgtgctcacgca
tttttacgtgcgctggaaggtttgtatgttgctccattaccatctccgccaaaagcaaat
aaagatgaaataaatcaatctttattcgcagatcttacggttgaatccggtctacgctac
ggtgatcgtttgtatgaagataagcagcgttcacgacgcgtggaactgctttattgtgaa
tgttgtgcaacattatttttgggcggtaaaccatctgctttctcagtcacaagtcaccgc
acagaactactaccaaacgatcctgacacagagaagctccccgaacatgccaaatcagtc
atgattgagagaagatcagcagaagagtatgtcctgttcatgccaaccgttgatcggttc
tggcccctcggtagtgaaaaactcactgatgacgattcttttggtaaatggagagaggca
agttacgatccgtttaccgcaacgattactcagcctatatccccagtaaaacccttacca
gaaaccgatattgcaggctggttttatagtgttccttcaggtaattttattcctccgaaa
agagagcagtcatccagtaaatcgcctggttcatcattgcctttccaatgcccagcatgc
ggaacctcatataaatacggtaaaggaaaacagtcgcctattcgtggttttcgagtaggt
ttcgcaaaaaccacgcagctacttgccagtacattaatggctgagttgcaaaaatctgga
gatcaagaacggctagtaacattctctgatagtcgacaagatgcggctaaggcagcactt
gatctcgaatcgggtcatcatgatgatattaggcgggagatcctcatcggttcgctgaaa
gagcttgtagcagataaatgttcacatgaaaaattgctgatacgtttagatgaggttaca
aaaaggaagaaagcacttgatattattgacgatcttaacaagctttcagatgaacaagaa
aaagaattaaacgatctttggaaagaacgaaaacgcatcaaagaaacattattactcccg
caggctgatagtgtctcgctagaagcaatattggaaaattcgcccaaagcgggtaaacca
cttaatagattgctggctaagttagttaaagctgggattcatccgacggaccgtacaggc
atcactcctgtgcccgatccgtcaaaacatagcgaaaacattaaaacttttacatggcaa
cagctctttgataaagaccatcacaataaatggtgctggaaggcttttccttactatgaa
accgatctagatattgcccgtcaggaaatttcacgcgacctgaaagaattagccggtgaa
agcgtgttcagcaaaacttattttgcgttagaagaagctggatggggatatccttgcatc
cctatttctgagaattattcccggaaaaaattagcaatatttgacgcattacttcgagtt
ttggctgacgcttaccgagtcgacccatcgcaatatcgtaatcccgataaccctgacacc
ccctggaaaacagcatcagcgatccctaaacgcaacagggtatattcctttgcaaattcc
atatgccatcagtctggtggtagtgttttagatttacttgatgagttcctcctgctcctt
gaaaaaacgggtcatcaaggtggcatcattgatattgggaaagtacatttccatttagtt
gaacccacaagtagcttctggcgctgcagcaagtgcggtcgcgttcacttacatctaggg
gcaaaaatatgcacccgctgccatgctcttttacctgaaatacaatacggtgaagcgggt
gtgcttcaaaagcaaaactaccttggtaaacgtattttatattcatctggcagccatcga
atgcgttctgaagagctcactggaatgactgaaaatccagctgcaagattacgtcgcttc
aaaggtattctgattgcggatgatgatgatattttaccaacggggctgaaaaactttgaa
ccagacactgaactggacagaaaggcacgcgttattgatgtgctttcagtcaccaccact
atggaagttggtgttgatattggggatttacgagctgtttttcaggcgaacatgccgcca
cagcgctttaattatcaacagcgtgtaggccgagctgggcgacgtggacaagcttttgcc
tttgtactaaccgcatgccgtagcaaaagtcacgatctgttctatttccgccacccggaa
aagatcactggtgatctgccacctcctcctttcttaactactaagctggaaatgatctgc
cagcgactggtacgcaaaatctggttggtggccgcgttcaaatggctaaggcaaaacaca
attaactcacaccagtcatggcctgtcgatgagcacagacaaaaacccgataaccatggt
gagttttttcaggttgactggctaaaagtgaattgggttacatggcaaccacgtatccgt
caggctctaatagcaacgattagaaatcgtgatgaatttgcccatgtctgcatgcctgac
gagcaatccttctatcatcgcattgtgcaattactgaccccagacaatctgattcaggat
attggtgcagcactaaacgacgatgctatgacaggcaaagggctggctgagtcgctggct
gagcgagggcaactcccgatgtatggtatgccaacccgcacgcgtctgttacaaaccagg
gccattgctactggcgaagatgatattcagtttgccagcatggatcgcgatttagacatt
gcaatacaagaatttgcaccggggaaatatctggtacaggacaaaaggcgctacttaacg
gcaggctatgccgggatgctgaagcgacgctatcctaaatctatagaatttgattctaac
gcgaatgaactgggagaaagcagaatgatgacagcctgtccagtctgtcacgtttgggct
ccaatcaatcacgagatcagcgaatgtactgcctgcggtgccgagacggaagatgctgag
cagtaccaatgctatgtaccttatgggtttattacctcactggaagataaatctgtcaaa
gaggatgtcgatcaaaccctaaccaatgctagccgtgtttcaatagctgaagcctactca
ttttctgccgtgtcggatttttacgctaatgtcgctatccaacttgaatctcaaatctgt
cttcaccggctgaaccgcggcacctatgtcgatgaacgatggagtggttttaatgcggcg
caaggcaatttacgggttccctttagaaatgggggaacgtaccagccattaacagcaaat
cgcgtttgggtagatagtcaattgcttgaggctgatcttttattaaagagacgtttcaca
ccattgcaggaaagtaaaacttcattttatcttgccgcacctaaagtgaccgatttgttg
gctctgatggtggtcaatacccctgcggggcttcagttgcagacacaggcatttcgtgct
gcagcgctctccgctgcatttatcatcgttaactatgcctcaaaagagctactcgacatt
gatccagaagaaatcgaaattctggaacctcgagtccagagattagaggacggcaggctg
gcaccgatactgcaaatggccgaccgtctggtgaatggttccggattatgcgagcgccta
cagcagataggaacatccggtacgccgatcattttggagataatgaaagctattgtcagt
aacaaaaatgatttcccgctaaaagagtttttagacgattctcatcgagaaaaatgtttt
caggggtgctactactgtcttcatagatatggcaatcaggcctatcacgggttgcttgat
tggcgacttgggctggacgttatccagctgcttctggatgaaaattatgatgccggatta
aatggtgatttttccgctcctggtatcgctgattggcgagagaacgcccagcgtttagca
aaagaggctgcatcactttttaatagcgaaattagaatggtaggccatattcccctaatt
ggcattggcccacagcgctgggtcgcggtgacacatccgttctggagcagtgatggcatt
tttaatgctaatcctgaacttgaaaggctattccttgagtggaaactggaaaaacaaacg
gttagtacgtttgatctctcgcgccgcatgggcgctgttatgaccaaattgaaaaaccca
gaaagtaacttgggtaattga
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