Yersinia rohdei: CH64_3772
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Entry
CH64_3772 CDS
T03610
Name
(GenBank) FAD binding domain of DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yro03400
]
CH64_3772
Enzymes [BR:
yro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CH64_3772
DNA repair and recombination proteins [BR:
yro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CH64_3772
Prokaryotic type
CH64_3772
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF1815
Motif
Other DBs
NCBI-ProteinID:
AJJ10453
UniProt:
A0A0U1HUU0
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All DBs
Position
4241304..4242746
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AA seq
480 aa
AA seq
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MATHLVWFRNDLRITDNLALHAACKDSQATVIAVFVATPVQWGKQDMAPRQAAFLWQNLQ
QLRAVLAERAIPLHYHQCDEFKDSINWLDDFCQQHQIDALFYNQQYEWNERQRDDALIAK
LAGRVICHSFHDSLLLPPGSVLTGNGKMYQVFTPFRRAFIQRLMMSDYRSVPAPKARQTK
IAIEPASWGPFDYPQQSVDNQLFPAGEEAALLRLRTFCREQVQDYQQQRDLPAVAGTSCL
SPYLALGILSPRQCVNRLRAECPEVFEKADGGAFIWLNELIWREFYRHLLVAYPRLCQHR
PFIDWTDAVVWNHSEQHLLAWQQGRTGYPIVDAAMRQLNETGWMHNRLRMISASFLVKDL
LINWRHGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDKKGIFI
RRWLPELSAVPDSDIHQPWHWAQQQQHPLDYPPPLVDHKQARLATLAAFDAAKRDGSKDP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccatctggtctggtttcgcaatgatttacggatcaccgataacctggcgctc
catgccgcttgtaaagactcacaagccactgttattgctgtatttgttgcgacaccagta
caatggggaaagcaggatatggccccacggcaggcggctttcttgtggcaaaatctgcaa
cagttgcgggcggtgttggcagagcgcgccataccgctgcactaccatcagtgtgatgaa
tttaaagattctattaactggctggatgatttttgccagcaacatcagattgatgcgctg
ttttataatcaacagtatgaatggaatgagcggcaacgtgatgatgcactgatagcaaaa
ctcgccggtcgggtcatttgccacagttttcatgatagtttgttattgccgccggggagt
gtgctgacgggaaatggtaaaatgtatcaagtatttaccccattccgccgagcatttatt
caacggttaatgatgtccgattatcgcagtgtgccagcaccgaaagcccgtcagaccaag
atagctattgaaccggcatcatggggcccgtttgattacccgcagcagtctgtcgataac
cagctgtttcctgcgggcgaagaggcggcgcttttacgcctgcgcactttttgtcgtgag
caggttcaggactatcagcaacaacgtgatctgcccgccgtggcaggtaccagttgtctg
tcaccttatttggctctgggaatactttcaccccgtcaatgtgttaatcgcttgcgggcg
gagtgtccggaggtgtttgaaaaagcggatggcggtgcctttatctggcttaatgagctg
atttggcgtgaattttatcgtcatttgctcgtggcgtatccgcggttatgccagcatcgt
ccctttattgactggactgatgcggtagtatggaatcattcggaacagcacttgctggcc
tggcaacaagggcggacaggttaccctattgttgatgcagcaatgcggcaactgaatgaa
acgggttggatgcataaccggctgcggatgattagcgccagttttctggttaaagatctg
ttgattaactggcggcatggcgagcgctattttatgtcgcaattgttggacggtgactta
gccgccaataacggcggctggcagtgggcagcttcaaccggtactgatgccgcgccctat
tttcgtatttttaaccccacgacgcagggagagcgttttgataaaaaaggtatttttatt
cgccgctggttacctgaattgtctgcggtgccagacagtgatatccaccagccgtggcat
tgggcgcagcagcaacagcacccattggattacccgccaccactggttgaccacaagcaa
gccagattggctacactcgcggcatttgacgccgctaagcgggatggcagcaaggatccc
taa
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