Yersinia rohdei: CH64_784
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Entry
CH64_784 CDS
T03610
Symbol
kdgR
Name
(GenBank) pectin degradation repressor protein kdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yro03000
]
CH64_784 (kdgR)
Transcription factors [BR:
yro03000
]
Prokaryotic type
Helix-turn-helix
IclR family
CH64_784 (kdgR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
TrmB
HTH_24
HTH_5
MarR_2
Rrf2
Fe_dep_repress
HTH_45
Mga
PadR
HTH_11
MarR
FUR
Motif
Other DBs
NCBI-ProteinID:
AJJ09201
UniProt:
A0A0U1HP10
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Position
complement(867718..868509)
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AA seq
263 aa
AA seq
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MAIADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMPKSTVYRFLQTMKSLGY
VAQEGESEKYSLTLKLFELGAKALQNVDLIRSADIQMRELSNETRETIHLGALDEDSIVY
IHKIDSMYNLRMHSRIGRRNPLHSTAIGKVLLAWRDRGEVEEILSHIEFTRSTKHTLGSA
AELLPVLDLVREQGFGEDIEEQEEGLRCIAVPVFDRFGVVIAGLSISYPTLRFSEDNKSE
IVKSLHRAARNISEQMGYREYPF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggctattgcagatttagataaacagcccgactctgtatcgtcggttctgaaagttttt
ggcatcttacaagcattgggtgaggagcgggaaattggtattaccgagctttctcaacgt
gtaatgatgcctaagagtactgtgtaccgcttccttcaaacgatgaagtctttgggctat
gtggcacaggaaggcgaatcagagaaatactccctcacgttgaagttgtttgagctgggg
gctaaagcgttacagaatgtcgatttgatccgcagtgcagatatacagatgcgcgaatta
tctaatgaaactcgtgaaactattcacttgggtgcattggacgaagacagcattgtttat
atccataaaattgattctatgtataacctgcggatgcattcccgtattgggcgtcgtaat
ccactgcacagtactgcgattggtaaagtgctgctggcgtggcgtgaccgtggtgaagta
gaagaaatcttgtctcatatcgagtttacccgtagtactaagcatacgttgggtagcgct
gcagaattgttgccagtgttagatttggttcgtgaacaaggttttggcgaagatatcgaa
gagcaagaagaaggtttgcgttgcatcgccgtgcctgttttcgaccgttttggtgttgta
attgctggattaagtatttcatatccgacattacgtttctctgaagacaataagagtgag
attgtaaaatcgttacatcgtgcggcgcgtaatatttctgagcagatgggctatcgcgaa
tatcctttttaa
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