Yersinia ruckeri YRB: BD65_1038
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Entry
BD65_1038 CDS
T03611
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00550
Peptidoglycan biosynthesis
yru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BD65_1038 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
yru01003
]
BD65_1038 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yru01011
]
BD65_1038 (pbpC)
Enzymes [BR:
yru01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
BD65_1038 (pbpC)
Glycosyltransferases [BR:
yru01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
BD65_1038 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
yru01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
BD65_1038 (pbpC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AJI94752
LinkDB
All DBs
Position
complement(1134980..1137316)
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AA seq
778 aa
AA seq
DB search
MNNPFLRRRRVWLALGFITLLLPAAVWLADRIWPLPLTEVQMARIVVAEDGSPLWRFADD
EGVWRYPVSIKQVSPYYLQALLTYEDRWFYQHPGVNPFSLARAAWQDLRAGKILSGGSTL
SMQVARLIEPHSRTLTGKLRQIWRTFQLEWHLSKDQILEIYLNRAPFGGTLQGIGAASWT
YLGKSPTNLTQAEAALLAVLPQSPSHLRPDRYPQRAKAARDKVLTRLAQYKVWPVVQVTE
IQQEDIWLAPRKVPQLAPLLARRLITGNKRDVIRTTLDAGLQRQLEDMAQGWRHQLPEKT
SLGILVVDHTTMEVKAYLGSVDFGDDSRFGHVDTISAWRSPGSTLKPFLYALALDDGLIH
GESLLQDVPRRFGDYRPGNFDTGFHGPVSASEALVRSLNLPAVQLLEAYGAKRLTANLRN
VGLRLRFPAHSEPNLALILGGTGSRLDQLVAAFSAFARGGMAGQLRFEPEQPLSQRRLFS
PGAAWIVRRIMAGEGRPVPDDVLPSVVPLAWKTGTSYGYRDAWALGLNARYTLGIWVGRP
DGTPVAGQFGYATAVPILHQVNNLLMSRLNQGHHALPTDPRPTSVSREEICWPGGQPLPS
GDTDCRQRRQSWVLDGTLPPTLAAAGQENIQGNQLSLWLNKQGQRVAADCPDATPAKLSL
WPLPLEPWLPLAERRAQRLPPVSQDCPPLTETDSPPLLILGIRNGATVRRLPGKNSLDLR
LVAQGGQGARWWFLNGEQIATTQNNQSWLQTLTVPGRYQLNVLDESGQVSKIEFQLLK
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaataatccttttctgcgccgtcgccgtgtatggcttgctctggggtttattacgctg
ctattgccggcggctgtttggctggccgatcgcatctggccgttgccactgacggaggtg
caaatggcgcgaattgtcgtggcagaagacggttcgcctctgtggcgctttgccgatgat
gagggtgtatggcgttatcccgtcagtatcaaacaagtttctccctactatttacaagcg
ttgctaacctacgaagatcgctggttttatcagcatcctggcgtaaatccattctctttg
gcacgagcagcctggcaagatttaagggcggggaaaattctctccggcggcagtacacta
tcaatgcaggttgcccgcttgatagaaccacattcgcgcactttgaccggaaaattgcgc
caaatatggcgtacttttcaactggaatggcatttatccaaagaccagattttagaaatc
tatttaaaccgcgcgccttttggcggaacattgcaaggaattggagccgccagttggact
tatctgggcaaatcccccaccaatctgactcaggccgaagccgcgctattggcggtgcta
ccgcagtcacccagccatttacggccggatcgctatcctcaacgtgctaaagctgcccgt
gacaaagtattaacccgcctggctcaatataaggtctggccggtagttcaggttactgaa
attcaacaggaggatatttggctcgcgccacgaaaagtgccgcaattggcaccgttattg
gcccgccgcctgatcactggcaataaacgggacgtgatccgaacgacactggatgccggt
ttacagcggcaactggaagatatggcgcaaggatggcggcatcagctaccggagaaaacc
tcacttgggattctggtggtagatcacaccacgatggaagtgaaggcttacctcggttcg
gtggattttggtgatgacagccgttttggccatgtcgatacgattagtgcttggcgatcg
cccggctcgacactcaaaccctttttgtatgctttggcgcttgatgatggcttgattcat
ggcgagtcattattacaggatgtgccacggcgttttggtgattatcgacccggcaatttt
gacactggatttcatggtcctgtcagcgccagcgaggccttggttcgctccctaaatttg
cctgcggtgcaattactggaagcttatggtgccaaacgattgactgccaatttacgtaat
gtgggtctcaggctgcgttttcctgcgcacagtgaacctaatctggcgttgattttagga
ggaaccggttcgcgtctggatcagttagtggcggcattcagtgcctttgcgcgcggcgga
atggccgggcaattgcgttttgagccagaacagcctttatctcagcgacgcttattttcc
cccggagcggcgtggatcgtccgccgaatcatggctggggaagggcgaccggttcctgat
gatgtcctccctagcgtcgttccattggcgtggaaaaccggaaccagctacggttaccgc
gatgcttgggcacttggcctgaatgcccgctatacgttgggcatctgggttggacgtcct
gatggcacaccggttgcgggtcagtttggctatgctacggcggtaccgattcttcatcag
gtcaataacctgttgatgtcgcgtttgaatcaagggcatcacgctttaccgacggatcct
cggcctacatcggtcagtcgggaggaaatttgttggccgggtgggcagccactgccaagt
ggtgatacggattgtcgtcagcgtcgtcaaagctgggtgttggatggcactctgccgcct
acattagcggctgcagggcaggagaatattcaaggcaatcagctgagtttatggttgaat
aaacagggtcagcgagttgcggcggattgtccggatgcaacgccagctaaactctcttta
tggccgctgccgcttgaaccttggttacctttggccgagcgtcgggcgcagcgcttgccg
ccggtcagtcaggattgtccgcctctgacggaaactgatagccctcctttattgattctg
ggtattcgaaatggtgcgacggtacggcgactacctgggaaaaatagcctggatttacgg
ttggtggctcagggagggcaaggtgcgcgttggtggtttcttaacggtgagcagattgcc
accacccagaacaatcaatcatggctgcaaaccctgacagtccctggccgctatcaactg
aatgttttggatgaaagtggacaggtgagtaagatcgaatttcaactattaaaataa
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