Yersinia ruckeri YRB: BD65_1222
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Entry
BD65_1222 CDS
T03611
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BD65_1222 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yru03400
]
BD65_1222 (recC)
Enzymes [BR:
yru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BD65_1222 (recC)
DNA repair and recombination proteins [BR:
yru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BD65_1222 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJI93755
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All DBs
Position
complement(1333953..1337324)
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AA seq
1123 aa
AA seq
DB search
MFTVYHSNQLDLLKAITTALIERDPLDNPFEPEVILVQSPGMAQWLQMQLAQQFSIAANI
EFPLPATFIWDMFTKVLPGIPKESAFSKDAMTWKLMWLLPDLLNEPVFSSLQRYLSDDGD
KRKIYQLAARVADLFDQYLVYRPKWLETWEQGHEIEGLDEAQHWQAPLWKALTEYTRQLQ
QPEWHRANLYQRFIHALHESDICPPGLPKRVFICGVSALPPIYLSALQALGKHIDIHLMF
TNPCRYFWGDIQNYAFLAKLQSRKRRHYREKTELSLFREPEQAARLFNDDGEQNLSNPLL
ASWGRLGRDHMYLLSQVDEIQEVQAFVDIDPDNLLHAIQHDMLELEDHAIIGTTQETLSS
SNQKRRLDPKDRSISLHVCHSPQREVEVLQDQLLAMLEANPELTPRDIIVMVADIDSYTP
YIQAVFANAPFERHLPFAISDRKASQAHPALQAFITLLDLPQSRFTSEQVLALLEVPALA
NRFGIDEHGLRRLRQWVGESGIRWGLDDDNVRELSLPATGQHTWRFGLTRMLLGYAMSSD
AGNWHDVLPYDESSGLAAELVGQLADMLMQLSHWRLQLAEARTLVAWSPLCRQMLDTFFE
QDNETEAVLALIEQQWLKVISYGINAQYPDIVPLTLLRDELAARLDNERISQRFLAGPIN
FCTLMPMRSIPFKVVCLLGMNDGIYPRTLPPLGFDLMAKQIQRGDRSRRDDDRYLFLEAL
LSAQQRLYISYIGRSIQDNSARYPSVLVSELLEYIGQSFHLPGDEAANVDESEQRVTAHL
LNWHPRVPFAAENFECDSEIQSYAAEWLPAAAAKGQAHPDFNQPLLPEPISEILLDDLIR
FYRHPVRAFFQRRLGVNFVIEETELPDEEPFTVDNLSRYQLNTQLLNALIDDGDANKVFA
RARASGGLPFGAFGEIYWQGQLEEMALLAEQVRNEQGDADSLELNIVLENITLTGWMHQV
QADGLMRWRPAALTAVDALLLWVEHVVYCATGGTGESRIYGRKGTVWRFGPLDESKARAY
LQTLVEGYQRGMSQPLMLLSKTGWAWLSQCFDSESEEILWDDETQDKARGKLLLAWQGSQ
QMSGEGEDPYIQRVFRFMDNERLAVILQETERYLLPVMCHNRA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtttatcattctaatcaattggatttacttaaagcaattaccactgcgttg
atagaacgagatccgctggataatccatttgagcctgaggttattctggttcaaagccca
ggaatggcgcagtggctacagatgcaactggctcaacaattcagcattgctgctaatatc
gagtttccgctacctgcaacctttatctgggatatgtttaccaaagtactacccggaatt
cccaaggaaagcgccttcagtaaagatgccatgacatggaagctgatgtggttattaccc
gatctgcttaatgaacccgtattttcatcattacagcgttatctgagcgatgatggtgat
aaacgcaagatttatcaattggctgcacgagttgccgacctctttgaccagtacttggta
tatcggcctaagtggctggaaacctgggagcaggggcatgaaatcgaggggttggatgag
gctcagcattggcaggctcctctttggaaagccttaaccgaatatacccgccaactacaa
caaccagaatggcaccgagctaacctttaccagcgttttatccatgctcttcacgaaagc
gatatttgtcctcccggtttacccaagcgggtgtttatttgcggtgtatccgcgttaccg
ccgatttatctgtcagcgcttcaagcgctgggtaaacatattgatatccatctgatgttt
accaacccatgtcgctatttttggggggatatccaaaattatgctttcttggccaaatta
cagagtcgtaagcgtcgtcattatcgagagaaaacagagctgagtttatttcgtgaaccc
gaacaggcggcacggctatttaatgatgatggggaacaaaacctgagtaatcctctcttg
gcctcatggggacgcttggggcgtgaccatatgtatttgctgtcccaggtggatgaaatt
caggaagttcaagctttcgttgatattgatccggataaccttttacatgcaatccagcac
gatatgctggagctggaagatcatgccattattggaaccacacaggagactttgtcctcc
agtaaccaaaaacgacggttagatccaaaagatcgttcgatcagccttcatgtatgccat
agcccgcagcgtgaagttgaagtcctacaggatcaactattggccatgttggaggccaat
cctgaactcacgccaagagatattattgtgatggtggcggatatcgatagctatacgcct
tatattcaggcggtttttgctaatgccccatttgaacgccatttaccttttgcgatttcg
gatcgcaaggccagccaggcacatcccgcccttcaggcttttattacactattggatttg
ccgcaaagccgctttacctccgagcaagtactggctcttttagaagtgccagcgctggcg
aacagatttggcattgatgagcatgggttgcggcgactacgtcagtgggtcggagagtcg
ggtattcgttgggggctggatgatgataacgtacgtgaactgtcgctacccgccaccggt
caacacacttggcgcttcggattgacgaggatgctgttgggctatgcgatgagtagtgat
gcaggtaactggcatgacgttctgccgtatgatgaatccagtggattagctgcggagctg
gttgggcaactggctgatatgctaatgcaactcagtcactggcgattacaacttgccgag
gcgcgaaccttggtggcgtggtcaccgttatgtcgccaaatgcttgatacctttttcgaa
caagacaacgaaaccgaggcggtgctcgcgctgatagaacaacaatggctaaaagtgatc
agctatggcataaatgcccaatatccagatatcgtcccgctaacgttattaagggacgaa
ttggccgcacgtcttgataacgaaaggattagtcagcgatttttagctgggccaattaac
ttttgtacattgatgcccatgcgctctataccgtttaaagtggtttgcctgttgggtatg
aatgatggcatttatccacgcacattaccgcctttaggattcgacttaatggccaagcag
atccagcgtggtgaccgtagtcggcgtgatgatgaccgctaccttttcctcgaagcactt
ttatctgcacaacaacgtctctatatcagttatatcgggcgctctattcaggataacagc
gcgcgctacccttcggttttagtcagtgagttgctcgaatatattgggcagagttttcat
ttacccggcgatgaagccgcaaacgtggatgaaagtgagcaacgtgttacggctcactta
ctaaactggcatcctagagtgccattcgcggcagaaaactttgagtgcgatagtgaaata
caaagctatgcggccgaatggttacctgccgctgcagcgaaagggcaagctcatcctgat
tttaatcagccgctattgcctgagccgatcagcgagatattactggacgatttaatccgc
ttttatcgtcatcccgtccgggcttttttccagcggaggcttggtgtcaactttgtgatt
gaagaaaccgaattgccggatgaagagccatttaccgtggacaaccttagccgctatcaa
ctcaatacccagttattgaatgccttaattgatgatggtgatgcaaataaagtctttgcc
agagcgagagccagcggtggactaccattcggtgcttttggcgagatttactggcaaggg
cagttagaggaaatggcattgcttgccgaacaggttcgtaacgaacagggcgatgccgac
agcctggaactcaatatcgttctggaaaatataaccctaaccggttggatgcaccaggtt
caggctgatggcttgatgcgttggcgtccggcggcactgacggctgtcgatgccttatta
ctctgggtcgaacatgttgtctattgtgccaccggtggaactggtgagagccgaatttat
ggaagaaagggaaccgtatggcgctttggcccattggatgaatcaaaagccagagcttat
ttgcaaacattggtcgagggttatcagagaggtatgagccagccgttaatgttattgagc
aaaacgggctgggcctggctgagccagtgctttgactcagagagtgaggaaattctttgg
gatgacgagactcaagataaagcccgaggaaaattgctgttagcctggcaagggtcacag
caaatgtcaggtgaaggtgaagatccttatatccaacgggttttccggtttatggataat
gagcgattggccgtgatcttacaggaaacggaacgttacttattacccgttatgtgccat
aaccgagcttaa
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