Yersinia ruckeri YRB: BD65_1236
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Entry
BD65_1236 CDS
T03611
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00300
Lysine biosynthesis
yru00470
D-Amino acid metabolism
yru01100
Metabolic pathways
yru01110
Biosynthesis of secondary metabolites
yru01120
Microbial metabolism in diverse environments
yru01230
Biosynthesis of amino acids
Module
yru_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BD65_1236 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BD65_1236 (lysA)
Enzymes [BR:
yru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BD65_1236 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AJI93876
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Position
complement(1353128..1354390)
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AA seq
420 aa
AA seq
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MPRPLNDRSFALNADNLRALPARFGCPVWAYDGDIIAERINQLRHFDVIRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALLAGYQPGKEPAEIVFTADVLDQATLERVVELGIPVN
AGSIDMLTQLGEQAPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHHDLAAAIAEIGK
YSLKLVGIHMHIGSGVDYQHLEQVCDAMVRQVITLGQDISAISAGGGLSIPYQNNEDIID
TEHYYGLWNKARQQIAMHLGHPVSLEIEPGRFLVAESGVLVAQVRAVKNMGSRHYVLVDA
GFNDLMRPAMYGSYHHISVLPADGRDLSHEPLIDSVIAGPLCESGDIFTQQAGGGLETRT
LPRAVIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGHPRLIRRRQTIEELVALEML
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcctttaaacgatcgctcttttgccctgaatgctgataatttacgcgcttta
cccgctcgttttggctgcccggtctgggcttatgatggtgatattattgcggagcgtatt
aatcaattgcgtcattttgacgtcattcgctttgcgcagaaagcttgctcaaatattcat
attttacgtttaatgcgcgagcagggtgtgaaagttgattccgtttctctcggtgaaatc
gagcgtgctctgctggctggttatcaaccgggaaaagagcctgcggaaattgtcttcacg
gccgatgtattggatcaggcgacgctggagcgcgttgtcgaattgggtattcctgttaac
gccggttcaattgatatgctgacacagcttggtgagcaggcacctggccatccggtctgg
ttgcgcgtcaatcctggttttggccatggccacagtcagaaaacaaatactggtggggaa
aacagcaaacacggtatctggcatcatgatttagctgcggcaattgccgagattggaaaa
tactcgctaaaactggttgggattcatatgcacattggatcaggggttgattaccagcac
ctggaacaggtttgtgatgcgatggtgcgccaggttataacattagggcaggatattagt
gctatatctgcaggaggcggtttatctattccgtatcaaaataatgaggatatcattgat
accgaacattattatggtctgtggaataaggctagacagcagatagcgatgcatttaggc
cacccggtcagtcttgagattgagccaggtcgttttctggttgccgagtcaggcgtattg
gtcgcacaggttcgcgcggtgaaaaatatgggtagccgtcactatgtgctggttgacgct
ggtttcaatgatctaatgcgtcctgcgatgtatggtagttatcaccatatttctgtattg
cctgcggatggaagggatctttcccatgagccgctgattgattccgtcattgctggaccc
ttatgcgaatctggggatatctttacccagcaggctggcggtggcttggagaccagaacg
ttgcctcgggcggtaattggcgattatctggttttccatgatacaggggcttatggcgca
tcaatgtcctccaattacaatagccgcccacttctgccagaggtcctattcgaaaatggt
catccgcgactgattcgccgccgtcagaccattgaagagttggtcgcattggaaatgctc
taa
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