Yersinia ruckeri YRB: BD65_1275
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Entry
BD65_1275 CDS
T03611
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00260
Glycine, serine and threonine metabolism
yru00630
Glyoxylate and dicarboxylate metabolism
yru00670
One carbon pool by folate
yru00785
Lipoic acid metabolism
yru01100
Metabolic pathways
yru01110
Biosynthesis of secondary metabolites
yru01200
Carbon metabolism
Module
yru_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BD65_1275 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BD65_1275 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BD65_1275 (gcvP)
00670 One carbon pool by folate
BD65_1275 (gcvP)
Enzymes [BR:
yru01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
BD65_1275 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AJI95456
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Position
complement(1386991..1389870)
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AA seq
959 aa
AA seq
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MTQTLSQLEHNDAFIQRHIGSNAEQQKEMLEAVGARSLSALIQQIVPADIQLPCPPPVGD
AATEHQALAELKAIASQNQRYKSYIGMGYSPVLTPPVILRNMLENPGWYTAYTPYQPEVS
QGRLEALLNFQQLTLDLTGLDLASASLLDEATAAAESMALAKRASKLKDANRFFVADDVH
PQTLDVVRTRAETFGFDVIVDRAEKVLELDGIFGALLQQVGTTGELHNYSALLAQLKQRK
IITCMAADLMTLVLLTAPGKQGADVAFGSAQRFGVPMGYGGPHAAFFACRDEFKRSMPGR
IIGVSRDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVYHGPQGLQRI
AGRIHRMTDILASGLQQAGLTLRFKTWFDTLTVEVKDKAAVLARALSFGINLRTDIHGAV
GITLDETTSRVDIQTLFNLLAGDAHGLDIDKLDAQVSQDSRSIPEALLRKDPILTHPVFN
RYHSETEMMRYMHRLEKKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPE
QAAGYQQMIGQLSQWLVQLTGYDAVCMQPNSGAQGEYAGLLAIRRYHESRNETERHICLI
PSSAHGTNPASAQMAGMSVVVVACDKQGNIDLHDLRQKAEVAGDELSCIMVTYPSTHGVY
EETIREVCQIVHQFGGQVYLDGANMNAQVGITTPGYIGADVSHLNLHKTFCIPHGGGGPG
MGPIGVKAHLAPFVPGHSVVQIDGMTTQQGAVSAAPFGSASILPISWMYIRMMGAQGLKQ
ASQVAILNANYIATRLKNAYPVLYTGHDGRVAHECILDIRPLKEEIGISEMDIAKRLIDF
GFHAPTMSFPVAGTLMVEPTESESKVELDRFIAAMLAIRAEIDKVAKGEWPLEDNPLVNA
PHIQAELIGEWQHPYSRELAVFPIAGVMENKYWPTVKRLDDVYGDRNLFCSCVPISDYE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgacccagactctcagccaacttgaacataacgatgcgtttatccagcgccatatcgga
tccaatgctgaacagcagaaagaaatgctggaagccgtaggtgcccgttcgttaagtgca
ttgatccagcagattgttccggcagacattcagttaccttgtccaccgccggtaggtgac
gccgccactgaacatcaggcgctggccgaacttaaagcgattgccagccaaaaccaacgc
tataaatcctatatcgggatgggttacagcccagtactgacgccgccagtcattctacgc
aacatgctggaaaatccaggttggtatactgcttatacgccttatcagccagaagtttct
caggggcgactggaagccttgttgaacttccaacaactgacactcgacttaaccggactg
gatctggcttccgcctctttgctggatgaagccactgcggcggcagaatccatggcattg
gccaaacgtgccagtaagttaaaagatgccaaccgtttctttgttgctgacgatgtgcat
ccacaaacccttgatgttgttcgcacgcgcgccgaaacctttggttttgatgtgattgtc
gatcgcgctgaaaaagtgttggagctagatggcatctttggcgcgctgctgcaacaagtg
ggtaccaccggtgaattgcacaattacagcgcattattggctcaattgaagcaacgcaaa
atcattacctgtatggccgccgatctcatgacattggtgctgctgacagcaccgggcaaa
cagggtgccgatgtggcatttggttcggctcagcgctttggtgtgccaatgggctacggc
ggcccacacgccgctttcttcgcttgccgcgatgagtttaaacgctcaatgccgggtcgg
attatcggggtttcccgcgatgctgccggtaatacggcgctgcgtatggcgatgcaaacc
cgtgagcaacatattcgccgtgaaaaagccaactccaatatttgtacttcacaggtttta
ctggccaatattgccagcctgtacgcggtttatcatggtccacaaggtttgcagcgtatc
gctgggcgaatccatcgtatgacggatattctggctagcggtttgcagcaggctgggctg
acgctgcgtttcaaaacctggtttgatacgctgacggttgaagttaaagacaaagcggca
gtattggcgcgggcgttgagctttggtatcaacctacgtactgatattcacggcgcagtg
ggtattaccctggatgaaacgacttctcgcgtagatattcagacgttgtttaatttgttg
gcgggtgatgcacacggtttggatattgacaaacttgacgctcaagttagccaagacagt
cgttccattcctgaagctttgttgcgtaaagatcctattctgacgcacccggtattcaat
cgctatcacagcgaaaccgaaatgatgcgttatatgcatcgtttggagaaaaaggatctg
gcactgaatcaagctatgattccattaggttcttgtaccatgaagttgaatgctgccgcc
gagatgattccaatcacttggccagagttcgctgaattgcatccgttctgcccaccagag
caggccgcgggttatcagcagatgattggtcaactatcacaatggctggtgcaattgact
ggctatgatgccgtgtgtatgcaaccgaactctggtgctcagggtgaatacgccggtttg
ctggcgattcgtcgctatcatgaaagccgcaatgaaaccgaacgccatatttgcctgatt
cctagctcggctcatggtactaacccggcatcggcgcaaatggctggtatgtcagtggtg
gtggtcgcctgtgataagcaaggcaacattgatttacatgacctgcgtcagaaggccgaa
gtagccggtgatgagctttcctgcatcatggtgacttatccgtcaacccacggtgtgtat
gaagaaaccatccgtgaagtgtgccagattgttcatcagtttggtgggcaggtttatctg
gacggcgcgaacatgaatgcgcaggtcggtattacgacgccgggttatattggcgcagac
gtatcccaccttaacctacataaaaccttctgtattcctcatggcggcggcgggccgggc
atggggccgataggtgtgaaagcacatttggcaccttttgttccgggtcacagcgtggtg
caaattgatggcatgaccacccagcaaggggcggtttctgcggctccatttggtagcgca
tctattctgccaatcagttggatgtacattcgcatgatgggtgcccaagggcttaaacag
gcgagtcaggttgccatattgaacgccaactacattgctacccgtctgaaaaatgcctat
ccagtgctgtataccggccacgatggtcgcgtagctcacgaatgtattctggatattcgt
ccgttgaaagaagagatcggcattagcgaaatggatatcgccaagcgtctgatcgatttt
ggtttccacgcaccaaccatgtccttcccggttgccggtactttaatggttgagccaacg
gagtctgaaagcaaagttgagttggatcgctttattgctgccatgctggccatccgtgct
gaaatcgacaaagtagccaaaggtgaatggccgctggaagataacccgctagttaatgca
ccacacattcaggctgaactgattggtgaatggcaacatccttatagccgcgagctggcg
gtattcccgattgcaggcgtaatggagaataaatactggccgacggtaaaacgtttggac
gatgtttatggcgatcgtaatttattctgttcctgtgtacctatcagtgattacgagtaa
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