KEGG   Yersinia ruckeri YRB: BD65_1419
Entry
BD65_1419         CDS       T03611                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
yru  Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:yru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:yru02048]
    BD65_1419 (hsdR)
Enzymes [BR:yru01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BD65_1419 (hsdR)
Prokaryotic defense system [BR:yru02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BD65_1419 (hsdR)
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2
Other DBs
NCBI-ProteinID: AJI95825
LinkDB
Position
1540177..1543290
AA seq 1037 aa
MTDYNTIAESNNFIVLDKYYKAQETGDSYQSEADLELEVIQDLRNQGYEFLSIKSPTAML
VNVREQLQSLNGVVFNESEWRRFTEQYLDSPSDSSLDKTRKIHIDYICDFTFDDGRLENI
YLIDKKNLMRNRVQIIQQFEQSGSHANRYDVTILVNGLPLVQIELKKRGVAIREAFNQIH
RYSKESFNGDNSLFKYLQLFVISNGTDTRYFANTTKRDKNSFDFTMNWAKSDNTLIKDLK
DFTATFFQKHTLLNVLFDYSVFDSSQTLLVMRPYQIAATERILWKINSSYKAKNWSTPES
GGFIWHTTGSGKTLTSFKAARLATELNFIDKVFFVVDRKDLDFQTMKEYQRFSPDSVNGS
DNTAGLKRNLDKDDNKIIVTTIQKLNNLMKAEADLPVYQQQVVFIFDECHRSQFGEAQKN
LKKKFKRFYQFGFTGTPIFPQNALDAETTASVFGRELHSYVITDAIRDEKVLKFKVDYND
VRPQFKALENETDDKKLTAAENNQAFLHPRRIEEITRYIIANYRQKTHRTFPGAKGFNAM
FAVSSVDAAKAYYEAFKQLQHRPDNHTDARKPLRVATIFSFAANEEQNAVGDITDESFDV
SAMNSSAKEFIDAAIDDYNRHFKTNFSTDSNGFQNYYRDLAQRVKNQDIDLLIVVGMFLT
GFDAPTLNTLFVDKNLRYHGLMQAFSRTNRIYDATKTFGNIVTFRNLEHATIDAITLFGD
KNTKNVVLEKSYKEYMEDFNDIVTGEAKRGFMTVVSELEHRFPDPANIDSEKERKSFVKL
FGEYLRAENILQNYDEFATLKALQKVDTSNPEALEAFKAEHYLDDEKLAELQTIRLPAER
KLQDYRSAYNDIRDWQRREKAANDKDDSTTDWDDVVFEVDLLKSQEINLDYILGLIFEHN
KQNKSKDGLTEEVRRLIRSSLGNRAKEGLVIDFIQQTNLDELPDKAGIIDAFFAFAQREQ
QREADALIKEENLNEEAAKRYIRTSLKREYATENGTELNETLPKLSPLNPQYKTKKQSVF
QKIGAFIEKFKGVGGQI
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgactgattataataccattgctgaatccaacaactttatcgttctcgataaatactac
aaagctcaggaaacaggcgacagctatcagagtgaggcagaccttgagcttgaagtgatt
caggatcttcgcaatcagggctatgaatttctttccattaaatcaccgacagcgatgctg
gtcaatgtgcgggaacagcttcagagcctcaacggtgtggtgtttaacgaaagcgagtgg
cgacgtttcaccgagcagtatctggacagcccgagtgacagcagccttgacaagacccgt
aaaatccatatcgactatatctgcgacttcacatttgatgatgggcgtctggaaaatatc
tacctgattgataaaaagaacctcatgcgcaaccgggtgcagatcattcagcagtttgaa
cagagcggctcacacgctaaccgttatgacgtaacgattctggttaatggcctgccacta
gtacaaatcgaactgaaaaagcgcggagtggcaattcgtgaagcctttaaccagatacac
cgttacagcaaggaaagctttaatggtgacaactccctgtttaaatacctgcaactgttt
gtcatttccaacggcaccgatacccgctactttgccaataccacaaagcgggataagaac
agtttcgacttcaccatgaactgggcgaagtccgataacacgctgattaaagatctaaag
gactttactgccacttttttccagaagcataccctgctcaatgtgttgtttgactacagc
gtgtttgacagcagccagacgctgctggtgatgcgcccgtatcagattgccgcaaccgag
cgaattttatggaaaattaacagctcctataaagccaaaaactggtcaaccccagaaagc
ggcggttttatctggcacaccaccggctcaggtaaaaccctgaccagctttaaagccgca
cgtctggcgaccgaactgaacttcattgataaagtcttctttgttgtagaccgtaaagac
ctcgatttccagaccatgaaggaatatcagcgcttctccccggacagcgtcaatggttct
gacaatactgcaggccttaaaaggaatctggataaagacgataacaaaattatcgtcacc
acaattcagaagctgaataacttgatgaaagcggaagccgacttaccggtctatcagcaa
caggtcgtcttcattttcgatgagtgccaccgcagccagttcggtgaggcccagaagaac
ctgaaaaagaaattcaaacgcttttatcagtttggtttcaccggcacgcccattttcccg
caaaacgcattggacgctgaaaccaccgccagcgtgtttggccgcgaactacattcttac
gtgattaccgatgcgattcgtgatgagaaagtgctgaaattcaaggtggattataacgat
gtccgcccgcagtttaaggcgcttgaaaacgaaaccgacgataagaaactcacggcggct
gaaaacaatcaggcttttttacatccgcgccgtattgaggaaattacccgctacattatt
gctaattaccgtcagaaaactcatcgtacttttccgggggcaaaagggttcaatgccatg
tttgcggttagtagcgtggatgcagccaaagcctattatgaagcctttaagcagttacag
cataggcccgacaatcacactgacgcccgtaagccacttagggtggcgaccatcttttca
ttcgcagcgaatgaagaacagaatgcggtcggtgacattaccgatgaaagtttcgatgtc
agtgccatgaacagcagcgctaaagaatttattgatgcggccattgacgactataaccgt
catttcaaaaccaatttcagtaccgacagcaatggcttccagaactattatcgtgactta
gcgcagcgcgtgaagaatcaggatattgacctgctcattgtcgtgggcatgttcttaacc
ggttttgatgcgccgaccctgaacacactgtttgtggacaagaatctgcgctatcacggt
ctgatgcaggcattctctcgcaccaaccgcatttatgatgccaccaaaaccttcggcaat
atcgtgaccttccgtaatctggaacacgcgactattgacgctatcacgctgtttggtgat
aagaataccaaaaacgtggtactggaaaagagctacaaagagtacatggaagattttaac
gatatcgtcaccggtgaagcgaaacgtggttttatgactgtagtctcagagctggagcac
cggttcccagaccctgcgaatattgacagcgagaaagagagaaaatccttcgtgaagctg
tttggtgagtatcttagagccgaaaacattctgcaaaactatgacgaatttgccacgcta
aaagcgctccagaaggtcgataccagcaacccggaggcactcgaagccttcaaggccgag
cattatctcgatgatgagaagctcgctgaattacagaccattcgccttcctgccgaacgc
aagcttcaggattaccgttcagcctacaatgacatccgcgactggcagcggcgcgaaaag
gcagcgaatgataaggatgactcaaccaccgattgggatgatgtggtattcgaggtagat
ttgttgaagtctcaggagattaacctggattatatcctcggtctgatattcgagcacaac
aaacagaacaagagcaaagacgggctgaccgaagaagtcagacgtcttatccgctcaagc
ctgggcaaccgagccaaagaagggctggtcattgattttattcagcagacgaaccttgat
gaactgccagataaggccgggattattgatgcgttcttcgcttttgctcagcgcgaacag
cagcgtgaggcagacgcattgataaaagaagaaaacctgaatgaagaggctgccaaacgc
tatatccgtacgtctctgaaacgagagtatgccaccgaaaatggtactgagctaaacgag
acgttaccaaaactcagcccgttaaacccgcaatataaaacgaaaaagcagtcagttttc
cagaaaatcggcgcattcattgagaaatttaaaggagtgggtggacagatttaa

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