Yersinia ruckeri YRB: BD65_1454
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Entry
BD65_1454 CDS
T03611
Name
(GenBank) hemagluttinin repeat family protein
KO
K15125
filamentous hemagglutinin
Organism
yru
Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
yru00536
]
BD65_1454
Glycosaminoglycan binding proteins [BR:
yru00536
]
Heparan sulfate / Heparin
Microbial pathogens
BD65_1454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
PT-VENN
Phage_holin_6_1
Motif
Other DBs
NCBI-ProteinID:
AJI96438
LinkDB
All DBs
Position
complement(1572655..1578300)
Genome browser
AA seq
1881 aa
AA seq
DB search
MGKVVLAGGQDNSGNYQTAAQILNLSGLIESGKNLLIYANTLTNRRHVLTANTQFVAGDT
VNGTAYWTPQNPDIPGGRYIEPPHGGKNNSSYINTSYTSTTSYNSIDKISPEAQLLAGGN
LTPHVGTLENYWSKVSAQGEINLTGVALQQDGWGSQQRLIEKVISKGYYHYRTYKGRLWT
NGWGPEVKERPSTQYASSLTAKTLTGSGTVINNGANPGSIASPASRDSTGKNITVEFNGV
SLTLPSGGLYRLNTDKGDYAPEPDGGLSFANVNTPSTLDSTGKRFDSQQTTVVSLTPSTG
ELQQVNAVGGKYEPDPEEALSFASLSSPSFVDSTGQQLNSNQSQGLNRSNLSMPNRAVGG
GYLIETNPAFANLNHWKGSDAYLQTLNNDPSLIHKRLGDNMYEQRLVRDQVLALTGKTVA
SDYRSAQEQFEQLFAAGAQYSKRFNLSPGTHLSAEQMATLTDNIVLMETREVAGQTVLVP
VVYLARVKPGELHANGALIAADNIELTDVQGLTNQGAIKATDNLRIGMAKDIILNSRGGL
LQAGNNLQLSTLNSDIDLTSARINATNLQLDSGRDVILRTASDQLSSNNGVVQRTQTVLG
PLASINISNNAVINTERDFIQQGAGLNVGQDLQVNTGGDWILNTVQSSDQISANYGYGRS
TSEHIRHLSSEVNVGGALTAKVDNFTAVGARINAGNIHLQAQNIDLSAASDRLQVTGSSS
SKRYTSSVNLYDETLLGSELISKGNIHLQAVRDINLSASKVETEGAMKLAAGGDVTLTTQ
TEQHDAQRNHTGKSQGLASRTTTRTEDSLSQRLAVGSMLSAGSIDVSGNTIAVTGSNVVA
DKDITLRAKENITVGTAQQSESESHLFEQKKSGLMSTGGIGVTVGSNSTKMTDTGQSMSN
VGSTVGSILGNVNMTAGADLTVTGSDVLAGKDISLTGKNVAILAAENQSSQTHSVEQKSS
GLTLALSGAVGSALNTAVTTAKDASEESNGRLAALQGVKAALGGAQAVQAGRLVEAQGGD
TASMFGVSASLGSQKSASKQHQEQTNVTGSTLTAGNNLTINATGDDNPASSGDIVVQGSQ
LKAGGDTTLDAARDVLLLGAANTQKTDGSNSSSGGSVGVSVGIGGSSAGLSIFANANKGR
GKEHGDGTTWTETQIDTGGTLSLSSGRDTALIGAQANGETVKVDVGRDLLLQSQQDSDNY
DSKQTSTSGGVSVAVIGGGGSANLSMSQDKLHSNYDSVQEQTGIFAGSGGFDITVGEHTQ
LDGAVIASTADKSKNSLDTGTLGFSNIENKADFKAEHQGGSLSTGGPVGSDLLSNLGGVV
LSGLGNDGHAEGTTQAAVSEGSITIRDADKQQQNVDDLSRDTDNANGSINPIFDKEKEQN
RLREAQLIGEIGGQVSDIVRTQGKIAEEKALKDPEAIQAAKETLAKKGILTPTEEQLTNQ
IRNTAMAPYGTGSALQRGIQAATAAIQGLAGGNMAQALAGASAPYLAEVIKKSTGDNQAA
NAMAHAVLGAVTAYASGNSVLAGAAGAATAELMAPTIIAAMGWDKDNLSEDQKQTVSALA
TLAAGLAGGLTGDSTADTVAGAQTGKNAVENNYLSSTEARALDKELSDCKASGSDCTPVI
EKYIEISNKNSKELMEACTGGGVGCVTWEELIQGATNVANDAHPSQFRLDEKLKDPDAAA
LVNYLNGADLKFLKDNITTGDRLLSVISDPTSWPVAVMGGKAIVTNAVTKGKEQLIAVGV
ASAASAGIQYGITGEVKLSDVIGSGAIATITAGKGYNPTVMWNAVGGYYQAEIKGDDPFM
AALLSKAGASAGYAAGNVIKIPMDKVLNPVSKQYEWVPTGVWTISKPVSQHPLPSIVGNM
GDSGVSELAPKYLEKKPEANK
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagtggtgctggcgggaggacaggataatagcggtaattatcagactgcggct
cagattcttaacctttcaggcctgattgaatcagggaaaaatctgctgatttacgctaac
acgctgactaaccgtcgtcatgttttaaccgccaatacacaatttgtggcgggcgatacg
gtgaatggtacggcttactggacgccacaaaacccggatatccccggaggacgctatatc
gagccacctcacggtgggaaaaataatagttcttacatcaatactagctatacatcgaca
acatcctataacagcatcgataagatcagccctgaggcacaactgttagctggcggcaac
ttgactccacatgttggtaccctagaaaattactggagtaaagtgagcgctcagggagag
attaatctcaccggtgttgcactgcaacaagacggttggggaagtcaacaacgcctgatc
gaaaaggtaatatcgaaaggctattaccattaccgaacctataaaggccgtttgtggact
aacggttggggtcctgaagtaaaagaacgtcctagcacccaatacgcctcaagtcttacg
gcaaaaacactgactggcagtggtaccgtgattaacaacggggcgaatcccggatccatt
gcctcgccagcgagccgtgatagcacagggaaaaatattacagtcgagtttaatggcgtt
tccttgacgctgcccagcggtgggttgtatcggcttaatacagataaaggtgattatgca
ccagagcctgacggtgggctttcttttgcgaatgtcaatacgccttccactcttgattcc
acgggcaagcgctttgattctcagcaaacaacggtggtgtcattaacgccatcaacgggt
gaactacagcaggtcaacgctgtgggtgggaaatatgaaccggatcctgaagaggcgtta
tcttttgcatcgctcagcagtccttcatttgttgactctactggtcagcagctaaattcc
aatcagtctcaagggctcaaccgatcgaatctttcgatgcctaaccgtgcggtgggcgga
ggttatctgatagaaaccaacccggcgtttgccaatctgaatcactggaaagggtcggat
gcttatttgcagacgttaaataacgatccttcactgatacacaaacgtttgggcgataat
atgtatgaacaacgtctagtacgggatcaggtattggcgttgacgggtaaaaccgttgcc
agtgattatcgcagtgctcaggaacagttcgagcagctctttgccgctggtgcgcagtac
agtaaaaggttcaatctttcacccggtacgcacctcagtgccgagcagatggcgacatta
accgacaatatcgtgctgatggaaacccgggaagtcgccgggcaaaccgtgctggtgccg
gtggtgtatctggcgcgtgtgaaaccgggggaactgcatgccaatggggcattgatcgcg
gctgataatattgaactaaccgatgtacaagggttaaccaatcaaggtgcgatcaaagcg
acagacaacctgcgtattggcatggcaaaagatatcatactgaatagccgtggcggattg
cttcaggcgggtaataacctgcagctcagtacactgaacagcgatattgacctgaccagc
gcgcggatcaatgccaccaacctgcaactggacagcgggcgcgatgtcatcctgcgcact
gccagtgatcagctcagtagcaataatggtgtggtacagcgcactcaaaccgttctgggg
ccgctggcgagcatcaatatcagcaataacgcggtgatcaataccgaacgcgactttatt
cagcaaggcgctggcctcaatgtcggccaagatcttcaggtcaataccggcggcgactgg
atcctgaataccgtacaaagcagcgaccagataagtgcgaattatggttatggccgttcg
accagtgagcatatccgccatctgagcagcgaggtgaatgtcggcggtgcgctaacggcc
aaggtagacaattttactgccgtaggcgcgcggattaatgcaggcaatattcatctgcaa
gcgcagaatattgacctcagtgctgccagtgaccgcttgcaggtgacggggagttcctca
agtaaacgctataccagcagtgtgaatctctatgatgaaacgctgctgggtagcgaattg
atctcaaaagggaatatccatctacaggcggtgcgagatatcaatctgagtgccagcaaa
gtggagactgagggtgccatgaagctggctgctggcggggatgtcacgctcaccacccag
actgaacagcatgacgcacagcgcaatcacaccggcaaaagccaaggtctggcatcccga
accaccacccgtaccgaagacagcctgagccagaggctggcggtcggctcgatgctgtca
gcgggttctatcgatgtcagcggcaacactatcgcggtcaccggcagtaatgtggtggca
gacaaggatattaccctgcgggcaaaagaaaacattaccgtgggcaccgcgcaacagagc
gagagcgagtctcacctgttcgagcagaaaaaatccggcctgatgagcaccggcggcatt
ggtgtgacggtgggtagtaacagcacaaaaatgaccgataccggtcaatcaatgtccaat
gtaggcagcaccgtcggcagcatactgggcaatgtcaacatgactgccggtgcagacctg
acggtaaccggttctgacgtgttagccggtaaagacatcagtctgaccggtaaaaatgtg
gcgattttggcggctgagaaccaaagtagccaaacccatagcgtcgagcaaaaaagtagc
ggcctgacgctggcgctgtctggcgcagtcggcagcgcactgaacaccgcggtcaccacc
gccaaagatgccagtgaagaaagcaatggtcgcctggctgcactgcaaggtgtcaaagcc
gccctcggtggtgcgcaggcggtacaagcaggccgactggtagaggctcaagggggcgat
accgccagcatgttcggcgtcagtgcctcattaggttcacaaaaatcggcctcgaaacag
catcaggaacagaccaacgtgaccggatcgaccttgacggcgggcaataatctgaccatc
aacgccaccggtgatgataaccctgcgagtagtggcgatatcgtggtgcaaggcagccag
ctcaaagccggcggcgataccactctggatgcggcccgtgatgtgttgctactcggcgcg
gccaatacgcaaaaaaccgacggcagtaacagcagcagcggcggcagtgttggcgtcagt
gtgggtatcggtggctccagtgctggcctgagtatctttgccaacgccaacaaagggcga
ggcaaagagcacggtgacggtacgacctggacggaaacacagattgatacaggcggcaca
ctgtctctcagcagcggtcgtgatactgcgctgataggcgcgcaagctaacggtgaaacc
gtcaaagtggatgtgggccgcgacctgttgctgcaaagtcagcaggacagcgacaattat
gattcgaagcaaaccagcaccagcggcggtgtcagtgtcgcggtcattggtggcggtggc
tcagccaatctgagcatgagtcaggacaagttacacagcaattatgactcggtacaggag
cagaccggtatttttgcaggctctggcggctttgatatcaccgtgggtgaacacactcag
ctcgatggcgcagtgattgccagcaccgcggacaagagcaaaaacagtctggataccggt
acgctgggcttcagtaacatcgaaaacaaagctgatttcaaagccgagcatcagggcggt
agcctgagcaccggtggcccagtggggtctgacctgctgagtaatctgggcggcgtggtg
ctgtcgggtctgggtaatgacggccatgccgaaggtaccacgcaggcagcggtcagtgag
ggcagcatcactattcgtgacgccgataaacaacagcagaatgtcgatgacctgagccgt
gataccgacaacgccaacggcagcatcaatcctatctttgataaggagaaggagcagaac
cggctgcgagaagcccaactgattggcgagatagggggtcaggtcagtgatatcgtacgc
acacagggcaaaatagcggaagaaaaagcgctgaaagacccagaggctattcaggctgcc
aaagagacactggccaaaaaagggatattgacgccaacggaagaacagctgaccaaccag
atacgtaataccgccatggccccttatggcaccggcagtgcactgcaacgggggattcag
gcggcaacggcggcgatacaggggctagcgggcggtaacatggcgcaggcactggcagga
gcctcagccccgtatctggcggaagtcattaagaaaagcaccggagataatcaggcggcc
aacgccatggcgcacgccgtgctgggtgctgtcaccgcctatgctagtggtaacagtgtg
ctggcgggcgcagcgggcgcggccactgccgagttgatggctccgactattatcgccgca
atgggctgggacaaggataatctatccgaagaccagaagcagacagtcagcgccctggcg
acactggctgcagggttggccggtggcttgaccggcgacagtaccgctgatacggttgca
ggtgcgcagacaggcaagaatgcggtggagaataactatctgagcagcacagaagccaga
gcgcttgataaagaactttccgactgtaaagcgtcaggcagtgattgtacgccagtgatc
gagaaatacattgaaatcagcaacaagaacagcaaagagctgatggaggcctgtaccggt
ggcggtgtaggttgcgttacatgggaggagcttatccaaggagcgacaaatgtggctaat
gatgcacatccatcgcagttccggttggatgaaaagctgaaagatcctgatgcagcggca
ttggtgaattatcttaacggtgccgatcttaaattcctgaaagacaacatcaccaccggt
gatcgcttgctgtctgttatcagcgatccgacttcatggccagtcgccgttatggggggg
aaagcgattgttaccaatgccgtgactaaaggtaaagagcagttaattgcggtgggggtt
gcttcggctgccagtgccggtatccagtatggaataacaggagaagtaaaactgtctgat
gtgatcggttcaggagctattgcaactatcacagcaggtaaaggctataacccgacggtg
atgtggaatgcagttggtggttattaccaagcagaaataaagggggatgatccttttatg
gcagcgttgcttagtaaagctggagcatctgctggttacgctgcgggtaacgttatcaag
atacctatggataaagtacttaatcctgtatcaaagcaatatgaatgggtgccaacagga
gtctggacgataagtaaacctgtctcgcaacatcccttaccctctattgttggaaatatg
ggagactcaggtgtctcagagcttgcaccaaagtatctagagaaaaaaccggaggcgaat
aaatga
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