Yersinia ruckeri YRB: BD65_1455
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Entry
BD65_1455 CDS
T03611
Name
(GenBank) hypothetical protein
KO
K15125
filamentous hemagglutinin
Organism
yru
Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
yru00536
]
BD65_1455
Glycosaminoglycan binding proteins [BR:
yru00536
]
Heparan sulfate / Heparin
Microbial pathogens
BD65_1455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg
ESPR
DUF4097
Motif
Other DBs
NCBI-ProteinID:
AJI96238
LinkDB
All DBs
Position
complement(1580843..1584793)
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AA seq
1316 aa
AA seq
DB search
MNKNLYRIVFNKARGMLMVVADIAASGRATSSASSGVGHTQRRCISALSSLSFSLLLALG
CVSLSAQANIVADARAPGNQQPTIINSANGTPQVNIQTPSSGGVSRNVYSQFDVDNRGVI
LNNGHGINQTQLGGFVNGNPSLARGEASVILNEVNSRDPSQLNGYIEVAGRKAQVVIANP
AGITCEGCGFINANRATLTTGQAQLNNGQITGYDVDRGEIIVRGAGMDSSRQDHTDLIAR
SVKVNAGIWANDLKVSAGRNLVDAAHQNINAKASDGSVRPTVAVDVASLGGMYAGKIRLI
GTESGVGVRNAGEIGASAGDITITADGMLVNSGQINSAQHLAVNTAAGIANAGVLYAQGN
TQLTTAGTLNNTGTVAAAGDTTLRAAEVNSSRNSLLGAGVKSDNSSVTSGTLSIDASGQL
IAQGKNISGTALALNARSLDLGGSQTQSRDLTLTAQSGDIDLTGTNLSASHRLSVSTTDL
LRTDKANLMAEQMALDAYTLSNVDGVIAQTGAADFNLKLPGYLDNRGGSLIAKGNLGIDV
ARLDSNGNSLLGAGVQSDGKLTATGDLAVATGDDLIAQGQTVAAGALILSGSQLDLTDGR
VQAREMQLTATAGDIVLTGAKVNAADTLSAKTGQTLHSDKAHLTAEQIEMTAGSLSNVDG
QIIQTGRGDFHLNLPGELDNRGGVLLAAGNMRLQADKLTSNDHSLLGAGIHADGRQADRG
NLQVNTAQALMAQGQNVAVDALTLSGSQIDLTGSQTQASNIALTARDGDVVTREATVLTP
GTLAITAAANREQNLDNRGGKLHANNLRLDLARLDNGHGEIAAATDAWIALQRDFTHQVG
TRLTAGRDLVLHSAGALINQHKLEAGRDMQVTADRISNADTHSGLLAGRDISLHSDSVFN
LGAIYATHRGQFTVNGNAENHGEIYTEQPLTFTTSGNLVNRGVLQTGGEMQLSTQGDLNN
SGTLYAGGDQMQLSINGNLSNAGSLYAAHGSLDLLTDGDLANSGSLYAGGNGKFTTHGNG
VNSGSVYSQGALQWQAGGKVANSGSLAALGDLQLHANDLLGTHQSLIGAGLKSDGNRASS
GDLTVSTEQGLVAEGQNIAAGQVALSGRDIDLTGSQTQGHAISLAAQSGDITLTDAVVNA
VTTLSARTAARLRTDKANLMAEQMALDAYTLSNVDGVIAQTGAADFNLKLPGYLDNRGGS
LIAKGNLGIDVARLDSNGNSLLGAGVQSDGKLTATGDLAVATGDDLIAQGQTVAAGALIL
SGSQLDLTDGRVQAREMQLTATAGDIVLTGAKVNAADTLSAKTGQTLHSDKAPSDG
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaacctgtaccgtatcgtgttcaacaaagcacgaggcatgttgatggtggtg
gcggatattgcggcctccggtcgagccacctcctctgcgtcatccggcgttgggcacacg
caacgtcgctgcatcagtgccttatcctcgctgagttttagcctgttactggccttgggc
tgcgtctcgttatccgcacaagccaatattgtcgccgatgcccgtgcgccgggcaatcag
caaccgaccattatcaacagcgccaacggtacgccacaggtgaatatccagacgcccagc
agtggtggtgtttcccgtaacgtttacagccagtttgatgtcgataatcgcggggtgatc
ctcaataacggccacggaataaaccagacccaactcggtggttttgttaacggcaacccg
tcgctggcgcggggtgaggccagcgttatccttaacgaagtcaacagtcgcgatccgagc
caactgaatggttatatcgaagtggcagggcgcaaagcgcaggtggtgatcgccaatcct
gccggcattacctgtgagggctgtggttttatcaacgccaatcgtgcgacgctaactacc
ggtcaggcacagctcaataacggccagatcaccggctacgatgtggatcggggcgaaatt
attgtgcggggcgcgggcatggacagcagccgtcaagatcataccgatttgatcgcccgt
tccgtcaaagtgaatgccggtatctgggccaatgacctgaaagtcagcgccgggcgcaat
ctggtggatgccgcgcaccagaacatcaatgccaaagccagcgatggcagcgttcgtcct
acggtagcagtggatgttgccagcttgggcggtatgtacgccggtaaaatccgcttgatc
ggcactgaaagcggtgttggggtgcgtaatgcgggtgaaataggcgcgtcagccggcgat
attactatcacggcggatggcatgctggtcaacagcggccagatcaacagtgctcagcat
ctggcggtgaataccgctgccggtatagcgaacgccggtgtgctttatgcgcagggcaat
acccagctcaccaccgcaggcacgttgaataacaccggcactgtcgcggcggcaggtgat
accacgctgcgcgcggctgaagtcaatagcagccgcaattctctcttgggcgcgggcgtc
aaatccgacaacagcagtgttaccagcggcactcttagcattgatgccagcgggcagtta
atcgcccaagggaaaaatattagcggcacggcgctagcgcttaacgcacgcagtctcgat
cttggcggcagtcaaactcaaagccgtgatctaacacttactgcgcaaagtggggatatc
gatctcactggcacgaatctgtccgctagccaccgcctgtctgtctcgaccactgatcta
ttacgcaccgacaaggccaacttgatggccgagcagatggcgcttgatgcatacacattg
tccaatgttgacggcgtgatcgcgcaaaccggggcggcagatttcaatctgaagctgccg
ggttatctggataaccggggcggtagcctgatcgccaaaggcaatttggggatcgacgtg
gcgcggctggatagcaacggcaacagcctgctgggtgcaggtgtacaaagcgatggcaaa
ctgacggccacgggggatctggcggtggcaaccggtgatgacttgattgcacaggggcaa
acggtcgccgccggtgcactgatcttgtcgggtagccagcttgacctgaccgacggccga
gtgcaggcgcgggagatgcagttgacggcgacggcgggcgatattgtgttaaccggtgca
aaagtgaacgcggcggataccttatcggcgaagaccgggcagacgctgcacagcgacaag
gcccatctgacggctgaacagatcgagatgaccgccgggtcactctctaacgtggacggg
cagataatccagaccggtcgtggtgatttccacctgaatctccccggcgagctggataac
cggggcggagtgctgctggcggccggtaacatgcgactgcaagccgacaagctgaccagt
aacgaccacagcctgctcggtgccgggatacacgcggatggccgtcaggcagaccgcggg
aatttgcaggtcaacacggcgcaggcgctgatggcgcaggggcagaatgtggcggtggac
gctctgacgctctccggtagccagattgatctcaccggcagccagactcaggccagcaat
attgcgctgaccgcccgtgacggtgatgttgtgacccgtgaggcgacggtgctcaccccc
gggactttggcgatcaccgctgcggccaaccgggagcaaaatctggataatcgcggtggg
aaactgcatgccaacaatctccggctggatctggcgcgattggataacggtcacggagaa
attgccgctgcgaccgacgcgtggatcgcgctgcaacgtgattttacccatcaggtgggg
acgcgtttaaccgcgggacgggatctggtattgcacagcgcgggggcgttgattaaccag
cataaactggaagccgggcgagatatgcaggtcaccgcggatcggatcagcaatgcggat
acccacagcggcctgctggctggtcgggacatctcattgcacagcgacagcgtgtttaac
ctcggggcaatctatgccacccatcgcgggcaatttaccgtgaacggtaacgccgaaaac
cacggagagatttataccgaacaaccgctgacgttcaccacctccggcaatctggttaac
cgtggcgtgctgcaaacgggtggagagatgcagttatcgacacagggcgatctcaacaat
agcggcacgctgtacgctggcggtgaccagatgcagttgtcgatcaacggtaacctgagc
aatgccggcagcctgtatgcagcccacgggagtctggatctgctgactgatggtgatctg
gccaacagcggcagcctgtacgccggtgggaacggcaagttcaccacgcacggcaacggg
gttaacagcggctcggtttatagtcagggcgcactacagtggcaggctggcgggaaggtt
gccaacagcggttcccttgctgcgctgggtgatctccaactgcacgctaacgacttactt
ggcacccatcaatccttgataggggcgggattgaaatctgatggcaaccgagccagcagc
ggtgatttgacggtcagcacggagcaaggcctggtggctgaagggcaaaatatcgccgcc
ggacaggttgcgctatcggggcgcgacattgatttaactggcagtcagacacaggggcat
gccatcagtctcgcagcccaatctggcgatatcaccttgactgatgcggtggtcaacgcg
gttacgacgctgtctgcccgaacggcagcgcggctgcgcaccgacaaggccaacttgatg
gccgagcagatggcgcttgatgcatacacattgtccaatgttgacggcgtgatcgcgcaa
accggggcggcagatttcaatctgaagctgccgggttatctggataaccggggcggtagc
ctgatcgccaaaggcaatttggggatcgacgtggcgcggctggatagcaacggcaacagc
ctgctgggtgcaggtgtacaaagcgacggcaaactgacggccacgggggatctggcggtg
gcaaccggtgatgacttgattgcacaggggcaaacggtcgccgccggtgcactgatcttg
tcgggtagccagcttgacctgaccgacggccgagtgcaggcgcgggagatgcagttgacg
gcgacggcgggcgatattgtgttaaccggtgcaaaagtgaacgcggcggataccttatcg
gcgaagaccgggcagacgctgcacagcgacaaggccccatctgacggctga
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