Yersinia ruckeri YRB: BD65_151
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Entry
BD65_151 CDS
T03611
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00541
Biosynthesis of various nucleotide sugars
yru01100
Metabolic pathways
yru01250
Biosynthesis of nucleotide sugars
Module
yru_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BD65_151 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yru01005
]
BD65_151 (kdsA)
Enzymes [BR:
yru01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
BD65_151 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
yru01005
]
Lipid A
BD65_151 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
POLQ_helical
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
AJI96372
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Position
164922..165776
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AA seq
284 aa
AA seq
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MKQKVVSIGDIKVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLDEGMKIFQELKKQFGVKVITDVHEISQCQPVAEVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEAGNDQVILCDRGSNFGYDNLVVD
MLGINVMVQSTGGHPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEA
HPEPNSAKCDGPSALPLDKLEPFLLQMKAIDDLVKSFPTLDTSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaaagtggttagcattggcgatatcaaagtagcgaacgacctaccctttgtg
ctgttcggtggcatgaacgtgcttgagtcacgcgatctggcgatgcgcatctgcgagcat
tacgtcaccgtgacccaaaagctcggtattccttacgtattcaaagcctcgtttgacaaa
gccaaccgttcttcgattcattcttaccgtgggccgggcttggacgaaggcatgaaaatt
ttccaggaactgaaaaaacagttcggtgtgaaagtgattactgacgtacatgaaatcagc
cagtgtcagcccgttgccgaagtggttgacgtcatccaattacccgcatttttggcacgt
cagaccgatctggttgaagctatggccaaaactggtgccgtgattaacgtgaaaaaacca
cagttcgtcagccctgggcaaatgggtaatatcgttgataagtttaaagaagcgggtaac
gatcaggtgatcctatgcgatcgcggtagcaattttggctacgataatctggtggttgat
atgttaggtatcaatgtgatggtgcagtctacaggcggtcatccagtgattttcgatgtc
acccacgccctgcaatgccgagatccgtttggtgcagcatcgggtggtcgtcgtgctcag
gttgccgaactggctcgcgccggtatggcggtgggcttggcggggttgttcattgaggct
cacccagagccaaacagcgcgaaatgtgacggcccatcagcattaccgttggataaacta
gaaccattcctattgcaaatgaaagccattgatgatctagtgaaaagcttccctacactg
gataccagtaaataa
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