Yersinia ruckeri YRB: BD65_1718
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Entry
BD65_1718 CDS
T03611
Name
(GenBank) sugar diacid recognition family protein
KO
K02647
carbohydrate diacid regulator
Organism
yru
Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yru03000
]
BD65_1718
Transcription factors [BR:
yru03000
]
Prokaryotic type
Helix-turn-helix
Other families
BD65_1718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
Mab-21_C
GAF
Motif
Other DBs
NCBI-ProteinID:
AJI95741
LinkDB
All DBs
Position
complement(1888820..1889938)
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AA seq
372 aa
AA seq
DB search
MRQNHLEKSTARQIVQRAMSIIQHSVNVMNEQGIIIASGDPLRVNQRHEGAVLALMENRV
VEIDSATAARLKGVKPGINLPIIFHQQLVGVIGISGEPAEVRAYAELVRMAAELILEHAA
LLEQSQWEKRYREELVSQLLAEHQQTTSIGSMAAYLGLNLSLPRIALIIKLDQQDHESLR
QLIEVLDATGWDHLVSMMGFNQLVMLKPLVADRLSRPINKQLQPFISNLQARFDVRVFVG
GVFPGIEGIRRSYLTAHAAQAMTERLGLRHKTLYYSDYSLPALLGEFAGSWQAEELGTSW
LQLCASDSKGVLRQTLQHYFDQNCDLSQSAKQLHIHVNTLRYRLQKIEEITGMKINELPS
ILRLYIGMKIYS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagaatcatctcgaaaaatctaccgctcggcaaattgtccagcgagccatgagc
atcattcagcattcagttaacgtaatgaatgaacagggtattattattgcctcgggcgat
ccgctgcgggtgaatcaacgccacgaaggcgcagtattagccctgatggaaaatcgggtg
gtagaaattgattcagcaacggctgccaggttaaaaggtgtgaaacctggcatcaatctg
ccgattatcttccaccagcaactggtgggtgtgattggtatttctggggagccagcagaa
gttcgggcttatgctgagctggtacggatggctgcggaactgattctggagcatgcggca
ttactggaacagagccaatgggaaaagcgttatcgcgaagaactggtcagccaattgttg
gctgaacatcagcaaacgacttctatcggctcaatggctgcttatttggggctaaatttg
tcgttgccgcgtattgcactgattatcaagttggatcagcaggatcatgaatccttgcgt
caattaattgaagttttagatgcaacaggatgggatcatctggtcagtatgatgggattc
aatcaattagtgatgctgaaacctttggttgcagacaggctttcccggccgataaataag
cagctacaaccttttatctccaacctccaggctcggtttgatgtgcgggtgtttgttggt
ggtgttttccctggcatcgaaggtattcggcgctcgtatttaactgcccacgcagcacag
gcaatgacggagcgcctagggctacgccataagacgctgtattacagcgactattctttg
cccgctttattgggcgagtttgccggtagttggcaagctgaagaactgggcaccagttgg
ctacaactttgcgcatccgatagtaaaggggtgctgcgacagacacttcagcattatttt
gatcagaactgtgatctgtctcaatcagcgaaacagctacatatccatgtgaatacccta
cgctatcgtctgcaaaagatagaggagattactggaatgaaaatcaatgagttaccttct
atattacggctgtatattggcatgaagatctatagctga
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