Yersinia ruckeri YRB: BD65_188
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Entry
BD65_188 CDS
T03611
Name
(GenBank) lysM domain protein
KO
K19304
murein DD-endopeptidase [EC:3.4.24.-]
Organism
yru
Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yru01002
]
BD65_188
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yru01011
]
BD65_188
Peptidases and inhibitors [BR:
yru01002
]
Metallo peptidases
Family M23
BD65_188
Peptidoglycan biosynthesis and degradation proteins [BR:
yru01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
BD65_188
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Csd3_N2
Peptidase_M23
OapA_N
LysM_OapA
NMB0315_dom_I
LysM
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AJI93716
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Position
207073..208389
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AA seq
438 aa
AA seq
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MQQIVRTIALAYNNLPRPHRVMLGSLTVMTLAVAVWRPFVYHPEHDLIAKSVILDTSQAQ
ILAPDASEPIDQTSPEDEIPQDELDTKDANEQGVHEYVVSTGDTLGNILTQYGVDMSDVT
LLASQNRDLRNLKIGQQISWTLNDTGDLQSLTWEVSRRETRTYNRVGNTFKETKELQKGE
WKNSVMTGRLDGSFVNSAKKAGLTNTEIRAVTKALQWQLDFSKLRKGDQFSVLMSREMLD
GRSEQSQLIGVRLRSGGKDYYAIRADDGKFYDRQGSGLARGFMRFPTMKQFRVSSNFNPR
RLNPVTGRVAPHKGVDFAMPVGTPVLAVGDGEVIIAKHDGAAGNYIAIRHGRQYTTRFMH
LKKLLVKPGQKVKRGDRIALSGNTGRSTGPHLHYEFWVNQQAVNPLTAKLPRSEGLSGKD
RSDYLAIAKEVIPQLQLD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcagatagtccgaactatcgctctggcgtataacaacttaccgcgaccccatcga
gtgatgttggggtcgttgaccgtaatgacgttggccgtcgccgtatggcggccatttgtt
tatcatccagaacacgatctcatcgcaaaaagtgtgatactggataccagtcaagcacag
atcctggctcccgatgccagtgaaccgattgatcaaacctcgccagaagacgaaattcct
caagacgaactggataccaaggatgctaatgaacagggcgtccacgagtatgtggtttca
accggtgatactctcggaaatattctgacccagtacggtgtcgatatgtccgatgtaacg
ctgctggcttctcagaatcgtgacttgcgtaatttgaagatcggtcagcaaatttcctgg
accttaaatgataccggtgacttacagagcctgacttgggaagtttctcgccgtgaaacc
cggacttataatcgtgtgggtaacacctttaaggaaaccaaggaattacagaagggtgaa
tggaagaacagtgttatgaccggtcgtctggatggtagctttgtcaatagcgccaaaaaa
gccggcttgaccaataccgaaatccgcgccgtaaccaaagcgttgcaatggcagttggat
tttagcaaattgcgtaaaggcgaccaattttcggtgctgatgtcccgtgagatgctggat
ggacgcagtgagcaaagccaactgattggtgttcgtctgcgctcaggcgggaaagactac
tatgctattcgtgcggatgatgggaaattctacgatcgtcaaggttctgggctggctcgt
ggctttatgcgcttcccgaccatgaaacaattccgagtttcttccaatttcaatcctcgt
cgcctcaacccggttactggccgggttgcaccacataagggcgtcgattttgctatgccg
gttggtacgccagtgttggccgtcggtgatggcgaagtgatcatagcgaagcatgacggt
gcagcgggtaactatatcgcgattcgtcacggccgccagtacaccacgcgttttatgcat
ctgaaaaaactactggttaagccgggtcagaaagtcaaacgtggtgatcgcatcgcatta
tccggtaacaccgggcgctctactgggccgcatctgcattatgaattttgggtaaatcag
caggcagtcaatccattgacagcgaaattgccacgttcggaaggcttgagtggcaaggac
cgcagtgattacctggcgattgcaaaagaagtgataccacagttgcagcttgactag
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