Yersinia ruckeri YRB: BD65_1931
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Entry
BD65_1931 CDS
T03611
Name
(GenBank) diguanylate cyclase domain protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BD65_1931
Enzymes [BR:
yru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
BD65_1931
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
RIP
Motif
Other DBs
NCBI-ProteinID:
AJI96402
LinkDB
All DBs
Position
2101795..2103804
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AA seq
669 aa
AA seq
DB search
MFEDQDTSILNTYFGTHSPFWRLAFDSQALELSAVKGITNIAIPLESLQTAKVRALTAIT
SSLELNITIYGNPVHLHLVGRKINDKEWGGTASAYSDTEAVARDLVMGLSFAEQVVSEAN
SVIVILDKNGSVQRFNRLSEEYTGKKEQDVIGKNVFELFMTQKEGASSRKNIEGFFKRGA
SYEVERWVNTMKGKRLFLFRNKFVHSGSGKNELFLICSGTDITKERRAQERLRVLANTDM
ITGLPNRHAIHERINSAIQTRGESSVGIIYLDLDNFKKVNDHYGHMFGDRLLKDVSLSIL
SCLKENEMLARLGGDEFIVLIENTSIIELEETAQRILDQMRAPFRIGLIEVYTGCSIGIA
LCPQHGETLENIIRSADTAMYTAKELGKRTYSIFSQEMNKKVSEYMWLDTNLRKGLEQHQ
LIVFYQPKISTRTGEVVSVEALVRWSTTERGLIPPIEFISYAEESGLIAPLGQWVLQTAM
QQAVDWQKKGIKLRIAVNISARQLVDEEIITAFIKSLESCGIQSSPIDVELTESCLIEDE
NAAINIIKQLKALGAEVHLDDFGTGYSSLSQLARIPIDAIKLDQSFVRGIDKNKVAQSLV
RAITVVAETLQMRVIAEGVETTAEEEFLNSLGVDEKQGFLYAKPMPAEELEHWLSKYTPH
LPNDLEDKT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaagatcaagacacatcgatcctgaacacatattttggcacccatagtccattt
tggcgtttagcttttgatagccaagctctggaactctctgccgtcaaaggcattaccaac
attgccataccccttgaatcacttcaaacagctaaagtccgcgctctcactgcgattact
tccagcctagagttaaatatcactatttatggcaacccggttcatttacatctagttgga
cgcaagattaatgacaaagaatggggaggaacagcctccgcgtattccgatactgaggct
gtagctcgcgatctcgttatggggctttcttttgctgaacaggtagtatcagaagccaat
tcagttattgttattcttgataagaatggatcagtacagcgctttaaccgtttgagtgag
gaatatactggtaaaaaagagcaggacgttatcggtaaaaatgtttttgaattatttatg
acacagaaagaaggtgcgtcatctcgaaaaaacattgaaggattttttaaaagaggtgct
tcttacgaggttgaacgctgggtcaatacgatgaaaggaaaacgactatttcttttccgc
aacaagtttgtccatagcggtagcggcaaaaatgagttgtttttaatttgttctggtaca
gatattactaaagaacgacgcgcccaagagcgactacgagttttagctaataccgatatg
attactggcttaccaaaccgccacgccatccatgaacgcatcaacagcgccattcaaacc
cgcggagaaagctcagtcggaattatctatctcgatctggataactttaaaaaagttaac
gaccattatggtcatatgtttggcgatcgcttactcaaagatgtctcactctcaatatta
agctgcctgaaagagaacgaaatgttagctcgcttgggcggtgacgagtttatcgttttg
atcgaaaacacctctattatcgaattagaagaaacagctcaacgcattcttgaccaaatg
agagcaccattccgcatcggtttaattgaagtttacaccggttgttccatcggtattgcg
ctatgtccacaacacggtgaaacattagagaatatcattcgcagcgcggatactgcgatg
tatacagccaaagagctaggcaagcgaacctattccatattttctcaagaaatgaataaa
aaagtttcggaatacatgtggcttgatacgaatttacgtaagggactggaacaacatcag
ttaatcgtgttttaccaacccaaaatctcgacccgaaccggagaagtcgtgagtgttgaa
gcattggttcgctggagtactacagaacgcggattaataccgccaatagagtttatctca
tatgcggaagagtcaggattaattgcacctttaggccaatgggtattacaaacagcgatg
caacaagctgtcgactggcaaaaaaaaggcatcaaattaaggattgcggtaaatatctca
gctcgccagttggttgatgaagagattatcactgcttttataaaatcactggaatcctgt
ggcatacagtcaagccctatagatgttgaattaaccgaaagctgtctgattgaagacgaa
aatgcggcaattaatattatcaaacagctgaaagcgctaggtgcagaagtccaccttgat
gactttggcactggctattcctcgctttcacagttagcccgaattcctattgatgccatt
aagttggatcaaagctttgtccgtggaatagacaaaaataaggtcgcgcaatcattggta
cgagccataactgttgttgctgaaacactccagatgcgggtaattgctgaaggagtggaa
acgacagcagaagaggaatttctgaactcacttggtgtcgatgagaaacaaggttttctc
tatgccaagccaatgcccgcagaagaactggagcattggctgagcaaatacactcctcat
cttcctaatgacttagaggataagacctga
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