KEGG   Yersinia ruckeri YRB: BD65_197
Entry
BD65_197          CDS       T03611                                 
Name
(GenBank) DEAD_2 family protein
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
yru  Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:yru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yru03400]
    BD65_197
Enzymes [BR:yru01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     BD65_197
DNA repair and recombination proteins [BR:yru03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BD65_197
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 SLFN-g3_helicase POTRA_2 UVR
Other DBs
NCBI-ProteinID: AJI96361
LinkDB
Position
216873..218777
AA seq 634 aa
MTDDFATNGALAQAITGFNPRESQQKMAQAIGEAIIAKQQLVVEAGTGTGKTYAYLAPAL
RADCKVIISTGSKALQDQLYSRDLPTVATALNFKGKLALLKGRSNYLCLERLEQQSLAGG
ELAGETLVDLVHLRGWSAQTVDGDISTCGDVAEDSFVWPLVTSTNDNCLGGDCPRYQDCF
VVKARRRAMDADVVVVNHHLFLADMVVKESGFAELIPSADVMIFDEAHQIPDIASQYFGQ
QLTSRQLIDLAKDINIAYRTEVRDSAQLQKSADRLSQSAQDFRLELGEPGYRGNLRDVLQ
QPAIQRALLRLDDALELCYDVMKLSLGRSAMLDAAFERATLYRNRLKRLKDVTMPGFSYW
YECNARHFVLALTPLSVSDRFRELIEEKAGTWIFTSATLSVNDQLGHFTQRLGLTDAKTL
LLPSPFDYANQALLCVPRDLPNANEPGGARKLAQMLKPLIDANQGRCFFLCTSHQMMRGL
AEEFRASMTLPVLVQGETSKGQLLAQFVAAGNALLVATSSFWEGVDVRGDALSCVIIDKL
PFTSPDDPLLKARIEDCRLRGGDPFNDVQLPDAVITLKQGVGRLIRDIDDRGVLVICDNR
LVMRPYGAVFLNSLPPTPRTRDLTKAIAFLKRQE
NT seq 1905 nt   +upstreamnt  +downstreamnt
gtgacagacgattttgcaacaaatggcgcattggcgcaggctataaccggttttaatcca
cgagaatcccaacaaaagatggcgcaggcgatcggtgaagccattatcgccaagcaacaa
ttggtggtagaagcgggcacggggaccggtaaaacctatgcttatctggctcccgcgcta
cgtgcggattgcaaagtcatcatttcaaccggttcgaaagccctacaggatcagctgtat
tcccgtgatttgccgacggtggcaactgcattgaacttcaaagggaaattggcgctgtta
aaagggcgttccaactatctgtgtctggaacgccttgagcaacaatcgttggctggcggt
gagttggcgggtgaaaccttggtggatctggtgcatttgcgtggttggtctgctcaaacc
gtcgatggtgatatcagcacttgcggcgatgttgccgaagacagttttgtctggccgttg
gtcaccagtaccaacgataattgtctgggcggtgattgcccgaggtatcaggactgtttt
gtggtcaaagctcgtcgtcgggcgatggacgcggatgtcgtggtagttaatcaccattta
ttcctggcagatatggtggtgaaagaaagcggctttgccgaattgattcccagcgctgat
gtcatgattttcgatgaagcccatcagattccagatatcgctagccagtattttggtcag
caactgaccagtcggcagctaattgatttggctaaagacatcaatatcgcttatcgcacc
gaagtacgagactcagctcaattgcaaaaaagcgctgaccgattaagtcagagtgcgcag
gattttcgtttggagcttggggagccgggataccgcggcaacttgcgagacgtgctgcaa
caaccggcgattcagcgggcgttactgcgtttggatgatgcgctggaactttgttacgac
gtaatgaaattgtctctgggtcgttccgccatgttagatgcggcttttgagcgggcaaca
ctttaccgcaatcggttaaaacggctgaaagacgtaaccatgccgggcttcagttattgg
tatgaatgcaatgcccgtcactttgtactggcattgacgccgctatcggtctctgaccgt
ttccgcgaattgatcgaagagaaggccggaacctggatttttacctccgcgaccttatcg
gtcaatgaccaactggggcatttcacgcaacgactcggtttaaccgatgctaaaacgtta
ttgctacctagcccatttgattatgcaaatcaggctttactctgtgtaccgcgcgacctg
ccgaatgcgaatgaacccggtggcgcgagaaaattggcgcagatgctcaagccgttgatt
gatgccaatcagggacgctgttttttcctctgcacttcacaccaaatgatgcgcgggttg
gcggaggagttccgtgccagcatgacactgcccgtgttggtgcagggtgaaaccagcaaa
gggcaattgttagcgcagtttgtcgcggccggtaatgcgctgttggtcgcgaccagcagt
ttctgggaaggtgtggacgtgcggggtgatgcactttcctgtgtgatcatcgataaactg
ccgttcacctcgccggatgatccattattgaaggcgcgaattgaagattgtcgcctgcgc
ggtggcgatccattcaatgatgtgcaactgcctgacgcggtgatcaccttgaaacaaggt
gtagggcgtttgatccgggatattgacgatcgtggtgtgctggttatttgcgacaaccga
ttggttatgcggccttatggtgcggtattcctgaacagtttaccgccaacgccacgtact
cgcgatctgacgaaagcgatagccttcctcaaacggcaggagtga

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